>PF18746 (274 residues) ARDTLAMQIVASLRREEYYQVIQRRGPISPRRADPHHDSFEAELGVVHFIQQNAYDEAAW LIFLMVHLGKPATDGWRRLRDIYGKLGQGRWDWAAGSTNPAAFEQWLAANWQSIRGKFGN HRKYESLDPSKQRAMGPAVVDYVNWVNAAGGHQALFSQIILTAGNDPNVIFDAFYKALPV KGYGRLGRFDWTTMLSRYGFAPAEAGSAYLKTATGPKAGMRLLFAGNANSGTGYVPLQQW LDELDTTLQVGMEVLEDAICNWQKSPTAFVHFKG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | ARDTLAMQIVASLRREEYYQVIQRRGPISPRRADPHHDSFEAELGVVHFIQQNAYDEAAWLIFLMVHLGKPATDGWRRLRDIYGKLGQGRWDWAAGSTNPAAFEQWLAANWQSIRGKFGNHRKYESLDPSKQRAMGPAVVDYVNWVNAAGGHQALFSQIILTAGNDPNVIFDAFYKALPVKGYGRLGRFDWTTMLSRYGFAPAEAGSAYLKTATGPKAGMRLLFAGNANSGTGYVPLQQWLDELDTTLQVGMEVLEDAICNWQKSPTAFVHFKG | |||||||||||||||||||
1 | 3n0uA | 0.08 | 0.06 | 2.41 | 0.62 | SPARKS-K | EELLKELERIREEAKPLVEQRFEEFKRLGEEGT---------------------EEDLFCELSFCVLTANWS---AEGGIRAQKEIGKGFVHLP---------LEELAEKLREVGHRYP-------------QKRAEFIVENRKLLGK-------LKNLVKG---DPFQSREFLVRNA--KGIGWKEASHFLRNTGVEDLAIL---------DKHVLRLMKRHGLIQEIPKGWYLYVEEILRKVAEAFGESPGKFDLYLWYLVKGKVDK----- | |||||||||||||
2 | 6a5qB | 0.13 | 0.11 | 3.89 | 0.83 | FFAS-3D | ------------MDKSELVQKAKL-----AEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQ-AYQEAFEISKKEMQPTHPIRLGALNFSVFYYEI--------------LNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLI---MQLLRDNLTLWTSE--------- | |||||||||||||
3 | 1vt4I | 0.12 | 0.10 | 3.51 | 0.41 | HHpred | NIKLRIHSIQAELRR-----LLKSK-PYENCLLLLNVQNAKAWNAFNLSLTTRFKQVTDFLSAATTHHSMTLTP--DEVKSLLKYLDCQDLPREVLTTNPRRLSIIAESIRDGLA----TWDNWKHVNCDK---LTTIIESSLNVLEPA-EYRKMFDRLSV---FPPSAHIPTILLSLIWF---DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS-----------------IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY-- | |||||||||||||
4 | 1st6A | 0.12 | 0.11 | 3.99 | 0.74 | MUSTER | NRNFTVEKMSAEINEIIRVLQLTSWDEDAWASKDT-----EAMKRALALIDSKMNQAKGWLR-----NAPPGDAGEQAIRQILDEAGCAGKERREILGTCKTLGQMTDQLADLRARGQGA----TPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSE---GEEHIRGIMSEARKVAELCEEPKELRSLGEISALTAKLSDLRRHGKGDAKQIATSLQNLQSKTAVHLEGKIEQAQRWIDNPTVDDRGVG | |||||||||||||
5 | 6eouA | 0.07 | 0.06 | 2.51 | 0.85 | CNFpred | --AEAYSNLGNVYKLQEAIEHYRHALRLKPDFID------GYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALG-------RLEEAKACYLKAIETQFAVAWSNLGCVFNAQ-------GEIWLAIHHFEKAVTLD-DAYINLGNVLKEARIRAVAAYLRALSFSHAVVHGNLACVYIDLAIDTYRAIELQPHFPD-----AYCNLANALKEK-----GSVAEAEDCYNTALRLCPTHADSLNNLANIKR----------- | |||||||||||||
6 | 1vt4I | 0.11 | 0.11 | 3.84 | 0.62 | HHsearch-2 | KQEEMVQKFVEEVLRINYKFLMSDRLYNNQVFAKYNVSRLQPYRQALLELRPAKISGKTWVALDVCDFKIFNCNSPMLQKLLYQID--PNWTRSDHSSNIKQVTDFLSAATTTH-ISLDHHSMPQDLPREVPRRLSIIAESIRNWKHVNCDKLTTIIESSLNVL-EP-AEYRKMFDRLSVFPPSDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALDQYFYSHIGHHLKNIRFLDFRFLEQKIRHDAWNASGSILNTL | |||||||||||||
7 | 5cwqA | 0.08 | 0.07 | 2.61 | 0.80 | Neff-PPAS | -ERESEEAERRLQEARKRSEEARERGDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQGD---------DEVLALALIAIALAVLALAEVACCRGN---------------SEEAERASEKAQRVLEEARKVSEEAREQGD-------------------DEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH | |||||||||||||
8 | 6c84A2 | 0.19 | 0.04 | 1.18 | 0.48 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKLK-------------QLGVVP-SKLGGDEKTANIKAIASAFDLTEDAINQAISQWVQ-PDYFVPLK- | |||||||||||||
9 | 3k2gA | 0.11 | 0.10 | 3.68 | 0.79 | SP3 | PQEPERQYLAEAPISIEILSELRQDPFVNKHNIALDDLD-LAIAEVKQFAAVG-------GRSIVDPTCRGIGRDPVKLRRISAETGLASSPETAARLSADDIADEIVAEALEGTDGTDARIGEIGVSSDFTAEEEKSLRGAARAQVRTGRLAHRVLDLVEEEGADLRHT---------VLCHNPSHDPVYQATLAQRGAFYADQGVQCPSDDEVARAILGLADHGTRYGGNGYAFVTKHFLPRLRRHGLDDAALETLVTNPRRDASI----EG | |||||||||||||
10 | 4m0mA2 | 0.09 | 0.08 | 3.08 | 0.84 | PROSPECTOR2 | DRLSYLQHSLTSI--ANYYHYHCDEKSSTNESV------KNLLLERVKESRTKPDSEAIKHLEVRQILESKNEKGF-----LWQQINHISPNARQY---CEQVKAALREHLEHNQVLSDTQKEEIRKADRDNIVNDSSKDSQQKYREIRREVIELNAKATTPEDDNQLTRSHFQKAYFEGDTQKTLNLESLSQTLNQLSKAHY--------GETSTDKITQRLFFNIPLPKLHADKLKERLVDLKEKGGNDVNAITRELGHYKKTGEELLVARK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |