>PF17624 (282 residues) CTVDVGRNVSIREQCRLRNGATFSKGDIEGNFSGPVVVELDYEDIDITGERQRLRFHLSG LGCPTKENIRKDNESDVNGGIRWALYIQTGDAKYGIRNQHLSIRLMYPGEKNTQQLLGSD FSCERHRRPSTPLGKNAEVPPATRTSSTYGVLSAFVVWIGSGLNIIWWTGIVLLAADALG LGERWLRLALSHRDKHHASRTAALQCQRDMLLRQRRRARRLHAVSEGKLQEEKKRQSALV WNVEARPFPSTHQLIVLPPPVASAPPAVPSQPPEYSSVFPPV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | CTVDVGRNVSIREQCRLRNGATFSKGDIEGNFSGPVVVELDYEDIDITGERQRLRFHLSGLGCPTKENIRKDNESDVNGGIRWALYIQTGDAKYGIRNQHLSIRLMYPGEKNTQQLLGSDFSCERHRRPSTPLGKNAEVPPATRTSSTYGVLSAFVVWIGSGLNIIWWTGIVLLAADALGLGERWLRLALSHRDKHHASRTAALQCQRDMLLRQRRRARRLHAVSEGKLQEEKKRQSALVWNVEARPFPSTHQLIVLPPPVASAPPAVPSQPPEYSSVFPPV | |||||||||||||||||||
1 | 6j0zC | 0.11 | 0.10 | 3.72 | 0.74 | SPARKS-K | GIPQARTEGILGGWARELGAEVRRGYEVTADTGTSVTVEAAGAD--GSPLSLRARYVVGCDGARSSKLAGIDFPGTEPAIELRFADVAGVQLRPRFSGERVGMVMVLPMGPDR-------CRVIYFDSSQPL-------RTAPEAITFEEVADSWQRLTGEDISGAWVQGMSAGVQDAVNLGWKLALDISGRAPQGHSERHPVGQRILTNTLAQRILYLGAELMGSHVSVQRHLAGMVTGLDIRHDVGEGDHPLLRRLPDRELVVDGEKIPFYSLLRPGRAV | |||||||||||||
2 | 1ciiA2 | 0.13 | 0.10 | 3.33 | 0.58 | FFAS-3D | --LDAQQARLLGQQTRNDRAISEARNKLS-------SVTESLNTARNALTRAEQQL---TQQKNTPDGKTIVSPEKFPGRSSTNDSIVVSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGL-----DYKRNILNDRNPVVTEDVEGDKKIYNAEVA---------EWDKLLLDARNKITSAESAVNSARNNLSARTNEQKHA-NDALNALLKEKENIRNQLSGINQKIAEEKRKQ---------------------------------------------- | |||||||||||||
3 | 4phxB | 0.16 | 0.06 | 1.88 | 0.32 | HHpred | --------------SQLRDGMKLATGRIACEPHDGFHIWINASQNGKQNN-HELKVKIGG-GWS--------SSLIEGRGVYRQ----------GE-EKQAIFDIMSDGNQYSA-----PGEYIFSVRLERPPIKATE------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 6ekvA2 | 0.12 | 0.11 | 3.77 | 0.54 | MUSTER | ---------FLKQALLSSQFI--SVDDIVADINTLTITNIIFGKVE-NSDGKNVDSSLK----PGKLKLSLQNNLIV--ELFDLTWEQGRGVTG-DFRQEYELTLESKSEKQIPILKVHDEPEIEYYVEEAQWKANED--------IVSAVVGTVFSILGALAGSALSKAGKLIRSKAIYINRSNVRQLRKDSGVTE-ELQRINRRNSSIASEDARFISNNGTTSIQTLGDKKKPSTGQRIAIGVKKITGTAVFGAVGLNFGELINYINAENNDYSAI-PGI | |||||||||||||
5 | 3eh1A | 0.12 | 0.05 | 1.62 | 0.57 | CNFpred | -----------------------------------DLLSLANINPD---AGFAVQLSIEESLT--------------TSLVCFQTALLYTSSKGERRIRVHTLCLPVVS-------------------------------------SLADVYAGVDVQA----AICLLANMAVDRSVSLSDARDALVNA----------VVDSLSAYGS------------------------------------------------------------------------- | |||||||||||||
6 | 2ifoA | 0.20 | 0.03 | 1.02 | 0.35 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------------------------SGGGGVDV-GDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM-------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3jc8Ma | 0.06 | 0.06 | 2.47 | 0.85 | Neff-PPAS | GMKPLPPEAIVDGALMNSTAIVQAVQDLMSELKVKGKDVAIGVSGHSVIIKKIQMPRMSQDELEESIQWEAEQYIPFDVKDVNIDTQILDGGGNDATGQMDVLLVAAKKDMAPVVVDVDAFAVQNMFSVNYDVPERETVFTRDVTIGGNQFTEEIQKQLNVSYEEA-----------------EALKIGGNGADADAVVPQDVERVLSSVAEQVAGEIQRSLDFYAGTAADSNFSKVYLSGGTAKIPEARTGVPVEILNPFRKIEVDNRKFDPAFVMDVAPM | |||||||||||||
8 | 1im3H | 0.24 | 0.07 | 2.33 | 0.54 | HHsearch | ------PWFQIENRCYIDNGKLFARGSIVGNMSRFVFPKA-----DYGGVGENLYVHADDVEFVPGESLKWNDVMPIFETLALRLVLQG-D--------VIWLRCVP--EL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5f42A | 0.13 | 0.10 | 3.58 | 0.78 | SP3 | AIIGIGKNVVIGENTELKSHVTIGDNVIGKNNRFQSIGDDPIDYTYKKGDFSQVVIIIRGGTAKEIGVTSVGNNNIIMCYV---HIGHDCKIGSYLVNGV----GLAGHDDYA--ILSSNV----GVHQFCRVGKHAFIAHAALVGK--DVPPYLMVTAVNATEGLKRRGFTPEEMKKIKEVYKVLYRKGLMMKEAEIIKEMAKEKVLEPFVDVIGTSRR-GILRDPNSSSVDKLAAALEHH---------------------------------------- | |||||||||||||
10 | 4dtdA | 0.05 | 0.05 | 2.29 | 1.02 | PROSPECTOR2 | TKATPDFPTHF-------PKSSIAGLVVAPANSAQKFGYVKSAQGDALFLTK-------DNQGSYQRPPSLQDGKNYQNWQTHTVELVSYPCEDDIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAESQGQTITTPSATPELRLLSQFASLTSAENDKELAANVFAYLTSIYLKTAELAKKFGANGLTDPKVKSKIVEILSKSDAKAVKHIKPQLQSRYSESLSKNVFQYFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |