Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KKTPLQHLKELVEELKTDLEKLKEYPEYDSTKYPVQKMLWDDNLSFGEREMGRVSSLKEEDSAVSEIPQRLFDFRNHIIWERLTRQVDQYRKKYPDNKEIEEEYKQHLEQTDSKNYASQEASNLQASVNEAEQAFEKIKEIAKEI |
1 | 4fz4A | 0.36 | 0.36 | 10.68 | 2.32 | SPARKS-K | | AMAKVEEVQKVVKELEKELGELDKVPSYGDQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAEL |
2 | 4fz4A | 0.37 | 0.37 | 10.86 | 2.97 | FFAS-3D | | --AKVEEVQKVVKELEKELGELDKVPSYDAQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAEL |
3 | 4fz4A | 0.36 | 0.36 | 10.68 | 5.96 | HHpred | | AMAKVEEVQKVVKELEKELGELDKVPSYGAQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAEL |
4 | 4fz4A | 0.34 | 0.34 | 10.31 | 2.10 | MUSTER | | AMAKVEEVQKVVKELEKELGELDKVPSYGAQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGALRDYVDREASEAMGRIKQRVAEL |
5 | 4fz4A | 0.36 | 0.36 | 10.68 | 1.24 | CNFpred | | AMAKVEEVQKVVKELEKELGELDKVPSYGDQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAEL |
6 | 4fz4A | 0.36 | 0.36 | 10.68 | 4.56 | HHsearch-2 | | AMAKVEEVQKVVKELEKELGELDKVPSYGDQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAEL |
7 | 4fz4A | 0.37 | 0.37 | 10.86 | 2.40 | Neff-PPAS | | -MAKVEEVQKVVKELEKELGELDKVPSYDAQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAEL |
8 | 4fz4A | 0.36 | 0.36 | 10.68 | 7.70 | HHsearch | | AMAKVEEVQKVVKELEKELGELDKVPSYGDQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAE- |
9 | 4fz4A | 0.36 | 0.36 | 10.68 | 1.49 | PROSPECTOR2 | | EAAKVEEVQKVVKELEKELGELDKVPSYGDQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAEL |
10 | 4fz4A | 0.36 | 0.36 | 10.67 | 1.79 | SAM | | --AKVEEVQKVVKELEKELGELDKVPSYGAQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDEASEAMGRIKQRVAEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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