>PF16324 (255 residues) YVGLASTIDGLGYEERAAADWMLKNVANSQYVSFEDIRNGNVDLGECKVMWWHLHIDGGI DNMDKFDAAAPAALQALPAVKDFYNNGGCLLLTRFATYYAAKLGATADGNNPNNCWGQVE ESGEITSGPWSFFVDGHENHPIYQGLVTTIDGKQGVYTCDAGYRITNSTCQWHIGSDWGG YPTLDDWRNLHGGLDLGYGGDGAVVVWEYPANAAGGRVLCIGSGAYDWYSYGVDASGDQY HGNVAKMTLNAINYL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | YVGLASTIDGLGYEERAAADWMLKNVANSQYVSFEDIRNGNVDLGECKVMWWHLHIDGGIDNMDKFDAAAPAALQALPAVKDFYNNGGCLLLTRFATYYAAKLGATADGNNPNNCWGQVEESGEITSGPWSFFVDGHENHPIYQGLVTTIDGKQGVYTCDAGYRITNSTCQWHIGSDWGGYPTLDDWRNLHGGLDLGYGGDGAVVVWEYPANAAGGRVLCIGSGAYDWYSYGVDASGDQYHGNVAKMTLNAINYL | |||||||||||||||||||
1 | 2gk3E | 0.10 | 0.09 | 3.18 | 1.25 | SPARKS-K | KGYDSFTSSKYEEGATWLLECLRKGGVDIDY-PAHTVQIAFPELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLIGGYLSFGIEAKANYKNTVLAEVLPVILDGDDRVEKPEGICAEAVSPEHPVVNGF-----------------------------SDYPVFLGYNQAVARDDADVVLTINN-DPLLVFGEYQ--QGKTACFSDCSPHWGTQQFS------WPFYTDLWVNTLQFI | |||||||||||||
2 | 1t0bG | 0.14 | 0.10 | 3.49 | 1.04 | FFAS-3D | --------------HTVIASYLAEAGFDAATAVLDEPEHTDEVLDRCDVLVWWGHIA-----------HDEVKDEVVERVHRRVLEGMGLIVLHSGHFSKI----------FKKLMGTTCNLKWREADEKERLWVVAPGHPIVEGIGPYIELEQEEMYGEFFDIPEPDET-----------------------IFISWFEGGEVFRSGCTFTRGKGKIFYFRPG--------HETYPTYHHPDVLKVIANAVRWA | |||||||||||||
3 | 1t0bG | 0.14 | 0.11 | 3.60 | 1.04 | HHpred | ----EFRHEKKDEQHTVIASYLAEAGFDAATAVLDEGL-TDEVLDRCDVLVWWGHIA----H-------DEVKDEVVERVHRRVLEGMGLIVLHSGHIFKKLMGTTCNLK-----WREA---------DEKERLWVAPGHPIVEGIGP------YIELEQ---EE--------------MYGE--FFDPEPDETIFISWFGGERSGCTF--TRGKGKIFYFRPGHET-YP-------TYHHPDVLKVIANAVRWA | |||||||||||||
4 | 2gk3E | 0.12 | 0.10 | 3.49 | 1.16 | MUSTER | SKGYSFTSSKYEEGATWLLECLRKGGVDIDYPAHTVQIAFPESLNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLIG-GYLSFGIEAKANYKNTVLAEVLPVILDGDDRVEKPEGICAEASPEHPVVNGF-----------------------------SDYPVFLGYNQAVARDDADVVLTI-NNDPLLVFG--EYQQGKTACFSDCSPHWGTQQFS------WPFYTDLWVNTLQFI | |||||||||||||
5 | 1t0bA | 0.16 | 0.12 | 3.89 | 1.61 | CNFpred | --------------HTVIASYLAEAGFDAATAVLDEPEHTDEVLDRCDVLVWWGHIA-----------HDEVKDEVVERVHRRVLEGMGLIVLHSGSKIFKKLMGT----TCNLKWREA---------DEKERLWVVPGHPIVEGIGPYIELEQEEMYGE----------FFDIPE--------------PDETIFISWFEVFRSGCTFTR--GKGKIFYFRPGHETYPTY--------HHPDVLKVIANAVRWA | |||||||||||||
6 | 2gk3E | 0.13 | 0.11 | 3.78 | 1.51 | HHsearch-2 | FIGESWHSSKYEEGATWLLECLRK-GGDIDYTVQIAFPESIDELNRYDVIVISDIGSNTFLQNE-TFYQLKIKPNALESIKEYVKNGGGLL-IGGYLSF----GIEAKANYLAEVLPV-ILDGDRVEKPEGICAEVSPEHPVVNGFSDY----P---VFL-------------------GYNQA---VARDDADVVLTI-NNDPLLVFG--EYQQGKTACF-SDCSHWGTQQ------FSWPFYTDLWVNTLQFI | |||||||||||||
7 | 2gk3E | 0.10 | 0.09 | 3.17 | 1.36 | Neff-PPAS | ---DSFTSSKYEEGATWLLECLRKGGVDIDYPAHTVQIAFPEELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLIGGYLSFGIEAKANYKNTVLAEVLPVILDGDDRVEKPEGICAEAVSPEHPVVNGF-----------------------------SDYPVFLGYNQAVARDDADVVLTINN-DPLLVFGEYQ--QGKTACFSDCSPHWGTQQFSWP------FYTDLWVNTLQFI | |||||||||||||
8 | 2gk3E | 0.14 | 0.11 | 3.89 | 1.98 | HHsearch | FIGESWTSSKYEEGATWLLECLRKGGVDIDYTVQIAFPESIDELNRYDVIVISDIGSNTFLQNE-TFYQLKIKPNALESIKEYVKNGGGLL-IGGYLSF----GIEAKANVLAEVLPV-ILDGDRVEKPEGICAEVSPEHPVVNGFSD----YP---VFL-------------------GYNQA---VARDDADVVLTI-NNDPLLVFG--EYQQGKTACF-SDCSHWGTQQ------FSWPFYTDLWVNTLQF- | |||||||||||||
9 | 2gk3A | 0.11 | 0.09 | 3.29 | 1.36 | PROSPECTOR2 | FIGESFTSSKYEEGATWLLECLRKGGVDIDYPAHTVQIAFPESLNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLIGGYLSFGIEAKANYKNTVLAEVLPVILDGDDRVEKPEGICAEAVSPEHPVVNGFS---DYPVFLGYNQAVA--------------------------RDDADVVLTI-NNDPLLVFG--EYQQGKTACFSDCSPHWGTQQFSWPF------YTDLWVNTLQFI | |||||||||||||
10 | 2gk3E | 0.12 | 0.09 | 3.21 | 1.08 | SAM | --------SKYEEGATWLLECLRKGGVDIDYTVQIAFPESIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLL-IGGYLSF-GIANYKNTVLA--EVLPV-ILDGDRVEKPEGICAEASPEHPVVNGFSD--------P-----------------------YNQA---VARDDADVVLTI-NNDPLLVFG--EYQQGKTACF-SDCSHWGTQQ-----F-SWPFYTDLWVNTLQFI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |