>PF16185 (243 residues) SYCEANSSISHTWVDEGISPCFYFTLVPAILLTISFFLGTIHCICYQKYGTAMEPKFIPR SRLYGFQLALSVLLVVQFLGGIVWQATTGGELPGYVVLYGCFSVLAWAWAISLLRVERRR VLVMDRTRGHSTFLLLFWALAFSAENLAFVSWYSPHWWWALENNKQQVQFALWLIRYICT GLLFFIGLKAPGLPRRPYMLLINEDERDVENSGQSLLGRTEENQSTWKGFRQKVRLLVPY MWP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | SYCEANSSISHTWVDEGISPCFYFTLVPAILLTISFFLGTIHCICYQKYGTAMEPKFIPRSRLYGFQLALSVLLVVQFLGGIVWQATTGGELPGYVVLYGCFSVLAWAWAISLLRVERRRVLVMDRTRGHSTFLLLFWALAFSAENLAFVSWYSPHWWWALENNKQQVQFALWLIRYICTGLLFFIGLKAPGLPRRPYMLLINEDERDVENSGQSLLGRTEENQSTWKGFRQKVRLLVPYMWP | |||||||||||||||||||
1 | 2z73A | 0.09 | 0.08 | 3.17 | 1.13 | FFAS-3D | -WYNPSIVVHPHWREFDQVPDAVYYSLGIFIGICGICGGNGIVIYLFTKTKSLQT----PANMFIINLAFSDFTFSLVNGLMTISCFLKKWIFGVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKIMIIFVWLWSVLWAIGPIFGWGAYTLYISRDSTTRSNILCMFILGFFGPILIIFFCYFN-------IVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIFLWP | |||||||||||||
2 | 3rkoB | 0.09 | 0.07 | 2.67 | 1.05 | CNFpred | -------------------PTPVSALIHAATMVTAGVYLIARTHGLFLM-----------TPEVLHLVGIVGAVTLLLAGFAALVQTD----IKRVLAYSTMSQIGYMFLALGVQAWDAAIFH-------LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSATAGFFSKDE---ILAGAMANGHINLMVAG----------VGAFMTSLYTFRMIFIVFHG | |||||||||||||
3 | 5do7B2 | 0.06 | 0.05 | 2.35 | 1.01 | Neff-PPAS | -----FGHGSIQLSFMDTAALLFMIGALIPFNVILDVISKCYSAMLYYELEDGLYTTGPYFFAKILGELPEHCAYIIIYGMPTYWLANLRPGLQPFLLHFLLVWLVVFCCRIMALAAAALL------PTFHMASFFSNALYNSFYLAGG-------FMINLSSLWTVPAWISKVSFLRWCFEGLMKIQFSR-----RTYKMPLGNLTIAVSGDKILSVMELDSYPLYAIYLIVIGLSGGFMVL | |||||||||||||
4 | 6ei3A | 0.12 | 0.11 | 3.79 | 0.99 | SPARKS-K | WWQLERARGTHPDAAVDGVRALLRVLVIFALVTPFFSLFDQKATWVLQGREMRMPAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPT----SLRRMTSGIAFSGVAWIAVGAIQVAMDGEPMHIAWQILPYALLTFGEVLVSATGIEAYSQAPPSMKGVVMSFWYLTTTVGNLWVLLSNVAVRNA-----------TVTSHIADTG---------LSEAAFLMFFFAAFAFLAALA | |||||||||||||
5 | 2ziyA | 0.09 | 0.09 | 3.28 | 1.10 | FFAS-3D | -WYNPSIIVHPHWREFDQVPDAVYYSLGIFIGICGICGGNGIVIYLFTKTKSLQT----PANMFIINLAFSDFTFSLVNGLMTISCFLKKWIFGVYGFIGGIFGFMSIMTMAMISIDRYNVIKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLYISRDSTTRSNILCMFILGFFGPILIIFFCYF-------NIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIWP | |||||||||||||
6 | 5twvB | 0.19 | 0.17 | 5.45 | 0.29 | HHpred | --CGTENH-SAAYQGVLNNGCFVDALN-VVPHVFLFITFPILFIGWGSQSSKVHIHHFPGHNLR---WILTFILLVCEIAEGILSDTESRHLHLY--MPAGMAFMAAITSVVYHNIETSNF------PKLLIALLIYWTLAFITKTIKFVKFYD-----HA-IGFSQLRFCLTGLLVILYGMLLLVEVNVIRVRRYIFEVKPPEDLQDGVRFLQPFVNL-LSKGTYWMNAFIKTAHKKP---- | |||||||||||||
7 | 5tgzA1 | 0.12 | 0.12 | 4.09 | 0.80 | MUSTER | GGRGENFMDIECFMVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRS----RCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRFKLGGVTASFTASVGSLFLAAIDRYISIRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYA-YILWKAHSHAPDQARMDIELMVYDVFGKMNKLIKTVFAFCSMLCLLNSTV-P | |||||||||||||
8 | 3rkoC | 0.09 | 0.07 | 2.50 | 1.04 | CNFpred | ----------------------EYLLMLGFFIAFAVKMPVLHGWLPDAHS----------QAPTAGSVDLAGILLKTAAYGLLRFSL-----PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ----TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGA-----VIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLW---------------------SKMKWLPALSLFFAVATLG | |||||||||||||
9 | 2pffB | 0.13 | 0.12 | 4.14 | 0.92 | HHsearch-2 | TLSHGSLELPEPADDEPTTPAELV----------------GKFLGYV-SSL-VEPSKVDIHALA--AKLLQTLVTKELIKNYITARFDGNTDDYFEELRDLYQTYHVLVGDLIKFSELIRTPSNTPDKDYLLSIPISCPLIGVIQLAHLRSYLKGAGLVAIA-ETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQ | |||||||||||||
10 | 5do7A2 | 0.09 | 0.07 | 2.84 | 0.92 | Neff-PPAS | ---RVRSNVLKGAIQDRVGLLYQFVGATPYTGMLNAVNLFPVLRAVSDQESQDGLYQKWQMMLAYALHVLPFSVVATMIFSSVCYWTLGLHPEVARFGYFSAALLAPHLIGEFLTLVLLGIVQNPNIVNSVVALLSIAGVLVGSGFLRNIQEMPIPFKIISYF---------TFQKYCSEILVVNEFYGLNF---------------------------TCAFTQGIQFIEKTCPGATSRFTM | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |