>PF16072 (293 residues) ATYHSPGALPAGATYHPSGYAPAGASYHPAGQIPPGASYYPSGGVPHGATYYPQAPVAAV PAGATYLPAGAGLPPGATYYPQAPKSSSGLGLGTGLVAGALGGAILGHVLTPTQTRVVEH APMSGGYGGGGGGGSNGGGEDKIIIINNGPPGSVTTTDAGSGTTVINAGGAQPAAPAAPA YQPAPAGAPAAAPAAAPAPVPSAPQTPLAPLTPSAAEGAIAATAAGAGLANAAAPAAAAP PPVDPNAPAAAAAPPAPGGIICVPVRVPEPDPKDPTKTIEVEKIACYPAPPPE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | ATYHSPGALPAGATYHPSGYAPAGASYHPAGQIPPGASYYPSGGVPHGATYYPQAPVAAVPAGATYLPAGAGLPPGATYYPQAPKSSSGLGLGTGLVAGALGGAILGHVLTPTQTRVVEHAPMSGGYGGGGGGGSNGGGEDKIIIINNGPPGSVTTTDAGSGTTVINAGGAQPAAPAAPAYQPAPAGAPAAAPAAAPAPVPSAPQTPLAPLTPSAAEGAIAATAAGAGLANAAAPAAAAPPPVDPNAPAAAAAPPAPGGIICVPVRVPEPDPKDPTKTIEVEKIACYPAPPPE | |||||||||||||||||||
1 | 4k0mC | 0.28 | 0.16 | 5.00 | 1.04 | SPARKS-K | -------------------------------------------------------------------------------------------------KVYTIDEAARTAKFDETVEVHAKLGSDQNVRGTVSLPHGLGKQVRVLAIAKGEKDYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------------------- | |||||||||||||
2 | 1maeH | 0.08 | 0.08 | 3.01 | 1.61 | Neff-PPAS | SASAAAAAAAAALAAGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRT------DYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA | |||||||||||||
3 | 2nbiA1 | 0.14 | 0.13 | 4.52 | 1.36 | PROSPECTOR2 | QSDLNPSSQPSECADVLEECLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSA---------------PSDCGEVIEECPLDTCFLPTSDPARPPDDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPADSARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSNCSPTMLPSPSPSAVTVPLT-------PAPPTR | |||||||||||||
4 | 4btgA3 | 0.15 | 0.15 | 4.94 | 0.96 | SPARKS-K | LKVKDLNGSARGLTQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWEAYVYRVGR--TATYPFDANAVVSGRLWSPSTPKELDPSGIDQLRSNLALFIAYQDMVKAEVIFSDEELSSTIIPEVSPFKLRPINETTSYIGQTSAGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQDVEPGISDRMSATLAPIGNTRGTVNSNGAEMTLGFP--SVVERDYALDRDPMVAGIVDESLEARPEVQGVAAEQ---GSLYLVNVRTELRIPVGYNAIEPLEAIAYNKPIQPS | |||||||||||||
5 | 2xd8A | 0.11 | 0.11 | 3.81 | 0.54 | FFAS-3D | ----------ANANQVALGRSNLSTGTGYGGATDKYALYLKLKGFQHETIARDLVTKRTLKNGKSLQMTSSFHTPGTPILGNADKAPPVAEKTAEKYDRLIFRSITRGARSASPVSATNFVEPGGTQIRVGSGTNESDAQGRCAVLNPRQYYALIQDIGSNGLVNRDVQGSAL-QSGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHIGPTPENANATGGVNNDYGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTSVIYQGDVILGRMA--MGADYPA | |||||||||||||
6 | 5mmmK | 0.15 | 0.03 | 1.14 | 0.30 | HHpred | ------------------------------------------------------------------------DIWNTTWYPKSAPDVDATDLILGRMASTIAIHIRGK-----NLASYTPSVD---------------MGAFVIVVNADKV--AVSGKK-------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5ay6A | 0.12 | 0.11 | 3.88 | 0.95 | MUSTER | ANLRSEQPVAAAVSYKVGTAGSPSKTNVVDSATNSHNSSTGIANPVSGNNEYLKENGVIVATGKVAYDAATNELVSSTIDYKGASPVTGSMTTTRINAAGTTVNLADLGIVNASGADDAEVVAGKLYDPSTKDNSKGVKPDFEVQIP------LSDSKGGQRTVTLSMLKGPGPNQWYAELRAKPGDLANNGNGQISTGIIE---TTDGKLKNTGSLFGTTSPTAITIKSSGYIAPTVTPPAVQPPTPPT--ADALGIDEQEVQIDLASAAGYNSQSVVQSVNTN-------- | |||||||||||||
8 | 3wfzA | 0.09 | 0.02 | 0.90 | 0.52 | CNFpred | ----------------------------------------------------------------ATNDY----GKGRGVYISGLPYS-------AANARLLERVLFYASHNE---DKYAAWSSSN--------------PECEVAHFPEQGLYCVINNTDPQKTTVTL----------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2wkcD | 0.37 | 0.04 | 1.12 | 0.59 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTIITVTAQANEK------NTRTVSKIISVPLFEKE | |||||||||||||
10 | 3iymA | 0.10 | 0.10 | 3.65 | 1.51 | Neff-PPAS | --AHVNMGLPLGFAPLASSDVRIPSALASVVNQFGEFSSPSIGTRFLLRDFEHAVSRVVFLADQLWTNGNSHHIFARSWLPMSNNDGNFKTIVASRLLEFISAGDLSILPTVLEDAVLSGEVPEAQVKDLLGDAPGVGQVDRRDRFDADVGQFTTAFTTQAASDVLTELGLPWNSPSAGHLNWQYSTKQRFTFLADTWAKLSAAYSQFFELSSGLATRQSATGSHAQMVDLTSVEGVTVLKAALALSAPEFSLAPPSCIFVGGLTRRVVVTTSLSVSQRATEFCQMDWR---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |