>PF16063 (261 residues) TNLLRLQLRKPNHWNWELSTSRSCNNIALPRILLYDNTGALLLDADGLSEQTYRPVNVPD CRRKLSTGSHNQRLQRARLPGDFNGLCIGEAAPSVTPTPVFPFSRQQIAGSCIDLSTHEL PNWQPHGMDGSRRSSSLRGARLEIQDHRLDQPQQLTQKSAYPTPPSTSTMTTTANSSSSG PREKRRYRRSHSSGQRSILERFSMTRGRHSSPEYIQEQVLEHKPRYYLCSSKAGTLVIQD ESFNRVRQRRRRQRNSSTENV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | TNLLRLQLRKPNHWNWELSTSRSCNNIALPRILLYDNTGALLLDADGLSEQTYRPVNVPDCRRKLSTGSHNQRLQRARLPGDFNGLCIGEAAPSVTPTPVFPFSRQQIAGSCIDLSTHELPNWQPHGMDGSRRSSSLRGARLEIQDHRLDQPQQLTQKSAYPTPPSTSTMTTTANSSSSGPREKRRYRRSHSSGQRSILERFSMTRGRHSSPEYIQEQVLEHKPRYYLCSSKAGTLVIQDESFNRVRQRRRRQRNSSTENV | |||||||||||||||||||
1 | 5a9qA | 0.13 | 0.12 | 4.25 | 0.81 | SPARKS-K | TDNGRIFLAGKDGCLYEVFTFSEDDPI---LQIAIDNSRNILYTRSEKGVQVYDGQDGQGMSASVSQNAIVSAAARTIDRSVFKIVQIAVIEN-------SESLDCQHAGVRLYFSTCPRPNLPPGFSASSTVEKPSKVHRALYSKGILLMAASENDNDILWCVNHDTFPFQKPMTQMTAGVDGHSWALSAIDTPLN-------KDHIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVEIERFFKLH | |||||||||||||
2 | 2ftcC | 0.10 | 0.07 | 2.43 | 0.42 | FFAS-3D | ------------------------------------RVG--LIALKLGMMPLWTK------------------------DGQKHVVTLLQVQDC---HVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNIIYVN---------------------- | |||||||||||||
3 | 5i2cA | 0.13 | 0.09 | 3.19 | 0.34 | HHpred | -------------------TPEDYTLMVLPPLQVAEAWLVLNVSS--H-------QAAGVTKIRSVIAPLAEHVIHT-LAQEFDGEPVP-VTRHGPSPTVHPIQSPQNRFCVLTLDPETLPAIAT----------------------------TLIDVLFYSHSTKEA---ASSSPEPSSI----TFFFSLIEGYAETQKKFPSDLT-LWRMVLFDECGIADISAYYISTFNFDHALVPEDGIGSVIELQR---------- | |||||||||||||
4 | 6fmlG | 0.11 | 0.11 | 3.99 | 0.89 | MUSTER | ATLMNLQFRKPDLFE-TSSPFFCGHFAETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTE-GVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPP | |||||||||||||
5 | 2vecA | 0.11 | 0.03 | 1.11 | 0.60 | CNFpred | VWLHHIVLDK--GESANFQLH-----GPRAYLQSIHG--KFHALTHHEEKAALTCGDGAFIRDE-------------------ANITLVADSPLR--------------ALLIDLPV------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 2pffB | 0.20 | 0.18 | 5.65 | 0.89 | HHsearch-2 | LNILE-WLENPSNTPDKLSIPISCPLIGVIQLAHYVVTAKLLKGATGAETDSWESFFVVRCYEAYPNTSLPPSILEDSLEN-------NEGVPSPMLSISNLQEQVQ---DYVNKTNSHLPAGKQVE------ISLVNGAKNLVVSLTLRKAKAPSGLDQSRIPFSERKLKFASPFHSHLPANKVVYDTFDGSDLGSISERIVDCIIRLPVKW---ETT--------TQFKATHILDFGPGGASGLTHR-NKDGTGGTINP | |||||||||||||
7 | 2tmaA | 0.07 | 0.07 | 2.73 | 1.64 | Neff-PPAS | MDAIKKKMQMLKLDKENALDRAEQAEADKKA--AEDRSKQLEDELVSLQKKLKGTEDELDKEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAE-----LEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDL | |||||||||||||
8 | 3cwfA | 0.21 | 0.07 | 2.31 | 0.35 | HHsearch | AKYLASLLDAGN-LNNQ-ANEKIIKDAGDVSASVIDTDGKVLYGSNGRSA-------------------DSQKVQAL-VSGHE-G--I---L-S-T-DNK------------LYY-GLSLRS-----------EGEKTGVLLSAS-------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2z7xB | 0.12 | 0.11 | 3.96 | 0.60 | SP3 | LNISKVLLVLGETYG-EKEDPEGLQDFNTESLHIVFPTNKEFLDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKL-QGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNTVSGTRMVHMLCPSKISPFLHSNNLLTDTVLETLILQMNQLKELSKIAEM-TTQMKS--LQQ-----LDISQNSVSYDEKKGDCSWTKSLLSL | |||||||||||||
10 | 4uxeA | 0.09 | 0.09 | 3.48 | 0.98 | PROSPECTOR2 | SAPLVSSSTGEFGGSLAANRTFTIRNTGAPTSIVFEKGPASGANPAQSSIRVWGNQFGGGSDTQRNKDGNIAFNINGTVPININASGLNVNGTATFGRSVTANGEFNDASNTYFLLTAAGDQTGGFNGLRPLLINNQSGQITIGEGLIIAKGVTINSGGLTVNSRIRSQGTKTSDLYTRAPTSDTVGFWSIDINDSATYNQFPKTNEVTGLPYLERGEEVKSPGTLTQFGNTLDSLYQDGGNPPQPSDIGALPSDNATGNV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |