>PF15926 (250 residues) DSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNSILKDAMAAGTPKSILLSASIK REGDSPTASPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCNRP LSGSEEEMSRHVEQCLAKREGSCMTEDDSVDIENENGNRFEEYEWCGQKRIRATTLLEGG FRGSGFIMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADVIPCTGEEPGEAKEREALRG AVLNGGTPST |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | DSQAPICPICQVLLRPGELQEHMEQELEKLTQLNISKNSILKDAMAAGTPKSILLSASIKREGDSPTASPHSSDDIHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCNRPLSGSEEEMSRHVEQCLAKREGSCMTEDDSVDIENENGNRFEEYEWCGQKRIRATTLLEGGFRGSGFIMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADVIPCTGEEPGEAKEREALRGAVLNGGTPST | |||||||||||||||||||
1 | 2tmaA | 0.07 | 0.07 | 2.94 | 1.51 | Neff-PPAS | DKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHA | |||||||||||||
2 | 5vf0B | 0.28 | 0.05 | 1.47 | 1.06 | HHsearch | -----------------------------------------------------------------------------------------------------------QVTKVDCPVCGVNIP--ESHINKHLDSCLSREEKKESLRS-S-----------------VHKR-------------------------------------------------------------------------------- | |||||||||||||
3 | 5mqfM | 0.09 | 0.08 | 2.94 | 0.84 | SPARKS-K | PETAVRGYRRFLKLSPESAEEYIEYLKDEAAQRLATNDERFVSKAGK---SNYQLWHELCDLISQNPDKVQSLNTDQLGKLWCSLADYYIRHFEKARDVYEEAIRTVMTVR---------------DFTQVFDSYAQFEESMIAAKMETAREEEDDVDLELRLARFEQL------ISRRPLLLNSVLLRQNPHHVHEWVALHQGRPREII---NTYTEAQTVDPFKATGKPHTLWVAFAKFYEDNGQLDD | |||||||||||||
4 | 3jc5A | 0.09 | 0.07 | 2.59 | 0.71 | FFAS-3D | -----------------DLGNKLVLEAKRTKQLYARSEDIIRNILKEVSNLRKNTEYLKEQQQLGMLDDKVAKCLLCMERNKRCLLAYQRLRTDILDSMAWNNNGLDLMSSITFSQQDTNNLSHQEQLKEYCDLITDLKSGDLVDIDLSGSLVPPSDA-----------FIDVRVLKDAG-------------------EIQTEY------GVFNLIKDSQF---------FVQQSDVERLIQQGYLQLI | |||||||||||||
5 | 6o9l3 | 0.14 | 0.11 | 3.84 | 0.40 | HHpred | -RGAGNCPECGTPLRKSNFRVQVDKEVEIRKKVLKIYNKR-EEDFPNNVDLDNTKKKMEIYQKENKDV---IQKNKLKLTREELEEALEVERQRRLFIQILKRNKELESSD---------L-PVALLLAQHKDRSTQLEMQLEK---P-K------PV-------------KPVTF-STGIKMGQLAPIH--K---LEEALYEYQPLQIETYGPHYLNH-VRAASPQDTSSLACHRALQDAFSGLFWQPS | |||||||||||||
6 | 4e40A | 0.11 | 0.10 | 3.64 | 0.72 | MUSTER | DSDDVA--ACELRAQLAGVSIASGILLRPAVIRNATTEFSRKKSED----ILAKGGAAVERASAAVDRVSGLDKTNETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAKESENQYVKEAAEECSESTNYDVTAKS-LAAALDKLPGVKEDNAVKTTFQSILTSLDNLDKDVKSVEQ------AEELETALEKAERQLEKAEKAAEEAETESSKV-- | |||||||||||||
7 | 5goxA | 0.14 | 0.05 | 1.78 | 0.52 | CNFpred | -----------------HINNELKRKEEQLSSYEDKL-----------------------------------FDVCGSQDFESDLDRLKEEIEKSSKQRAMLAGATA-ENQSCCPVCQRVFQ-TEAELQEVISDLQSKLRLAPDKLKS------------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 5vf0B | 0.26 | 0.04 | 1.36 | 0.93 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------QVTKVDCPVCGVNIP--ESHINKHLDSCLSREEKKESLRS------------------SVHKR-------------------------------------------------------------------------------- | |||||||||||||
9 | 5nnvA | 0.08 | 0.06 | 2.58 | 1.18 | Neff-PPAS | --------------EELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVK-EKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSES----------------------SSTSGEEKLEEAAKHKLNDKTKTIEALRRDQRIKLQHGLDTYERELK | |||||||||||||
10 | 3wwqF | 0.27 | 0.04 | 1.23 | 0.61 | HHsearch | ------------------------------------------------------------------------------------------------------------AALRSCPMCQKEFAPTQLDVDSHLAQCLAESTE---------DV-----------TW------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |