>PF15768 (270 residues) GPLYKHFDWERKSAKQAEARLSQRLQRLEDICLYHMKLLTREQRQLQKELQRLQQADIIK KKFSSYFGNGIQQRPEDVLVFSPHGEQKHRVPQANKVRALAASVTPKIYKTKSQMPPFHR TGLKDPRRSKEQLPSQNDKTPDFIEEKSQAQENDSINPPKGKDANTGISLLCQDQEVSTQ TPDQGLSSSPAGDSGMAHVDETRSKDADGNLDHDTGKQIPPNPMECAGNFKVKSTTSTYL ELFAKVRNAHYLRHRVPPESERLLSLGEIF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | GPLYKHFDWERKSAKQAEARLSQRLQRLEDICLYHMKLLTREQRQLQKELQRLQQADIIKKKFSSYFGNGIQQRPEDVLVFSPHGEQKHRVPQANKVRALAASVTPKIYKTKSQMPPFHRTGLKDPRRSKEQLPSQNDKTPDFIEEKSQAQENDSINPPKGKDANTGISLLCQDQEVSTQTPDQGLSSSPAGDSGMAHVDETRSKDADGNLDHDTGKQIPPNPMECAGNFKVKSTTSTYLELFAKVRNAHYLRHRVPPESERLLSLGEIF | |||||||||||||||||||
1 | 5ytiA | 0.10 | 0.10 | 3.67 | 1.29 | SPARKS-K | ELFQNNRQAADSALRLEEGILSNAVNSLHRLREIQIQTLAVEAQALLNQLLDYANTKDSNGSYFS--GSKSLTQPGQYVYNGDSTQRFQAVTTSLLVAVNGDNVFRIPSGNGRFAIRETLTPNTGTASVSSGSVTNEAAFVPDNYTTFALNSQGNLVVVSGTLSGNVIP----PSGLPDDAPLYQEGSAIGFNGEVVSGL---PKAGDSFSISPAKNESIFSTVQRINNLNKPYTSSVLLAQIDSALGHILSVQSDLGARLNQLETAEKA | |||||||||||||
2 | 5owvA | 0.10 | 0.10 | 3.59 | 1.13 | MUSTER | NYLFNEGEKSKIALRAYKKELHLELKNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSIAKIDNLVLLLAKKLKERLIDEFKLKNNAQKLNLSRILNIVDITTKDGINDILREIKFENIKKIEELKTNLSLKYDFLKDDFDN-GFEGFKDGISKNIDSIFQSEKFALLRLKIEKNLKSDLYELETNLDTVIFDTFKEFKMSEIL-NSLNINGAFFEFDKLKHEKVLQSLKNQDANILNSFE-ENLEKIELKQLE | |||||||||||||
3 | 2tmaA | 0.07 | 0.07 | 2.99 | 2.17 | Neff-PPAS | --LKLDKENALDRAEQAEADKKAAEDRSKQL-EDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHA | |||||||||||||
4 | 5gaoE | 0.08 | 0.07 | 2.80 | 1.04 | PROSPECTOR2 | A--------AAAAAAAAAAA-------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAEAYKKLSQSNKK | |||||||||||||
5 | 3l6wA2 | 0.12 | 0.09 | 3.24 | 1.13 | SPARKS-K | -----------------------------------------NIEELEEVLRSLRLKSRV---FAGFVLSGIRTTAVKVYIKSGTDSDDEKEMPWAYERLYRFDITETVHNLN--LTDDHVKFRFDLKKYDHTELDASVLPAPIIVRRPNNAVFDIIEIPIGKDVNPPKVVVKRGTKIMFMSVDEAVTT------PMLNLGSYTAMFKCKVPPFSFHAFEL--GKMYSVESGDYFMTASTTELCNDNNLRIHVHVD--------------- | |||||||||||||
6 | 3jc8Na | 0.12 | 0.07 | 2.64 | 0.62 | FFAS-3D | --WYDDRQSELEAHQAGVASTKARIAELEKI-IGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMMDALASATPKKVWVKTFSENNNASAVSHDEVAEFMRGLNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDPEAQVSPFFKNIDLQTAKQVGGAQVGVPILVEFKITMTSN----------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5gmkt | 0.06 | 0.01 | 0.50 | 0.29 | HHpred | ----SRYIPNVSLLGIVDSYLKHQEIVLSNQWRINNDYIRQTCTIVEEMNIQQRKQ-IN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6etxG | 0.09 | 0.09 | 3.39 | 1.13 | MUSTER | VFNHSRDRWLRVLSPFAPDYIQRSLFHFSFLRFPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRV--QMTRMIDLLEEY | |||||||||||||
9 | 4p9tA | 0.14 | 0.03 | 1.13 | 0.51 | CNFpred | -------SVKRGTMVRAARALLSAVTRLLLADMADVMRLLSHLKIVEEALEAVKNAT-NEQDLANRFKEFG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6gmhQ | 0.20 | 0.19 | 5.91 | 0.65 | HHsearch-2 | GSLYAASEDQ---EKRDIAKLKKVTEYPDDVAWIELAQ-ILEQTDIQGALSAYGTATRILQEKQADLNNGRLGNLGEAKYFAKAEA-EHDEHSYNLARLYEFHEAEKLYKNILREHPNYV----DCYLRLGRDKGNFYEASDWFKE---ALQ---INQ-DHPDANLHLAKQEWGQKKFERILKQPSTQ-SDTYLALGNVQPTRDREKEKRHLAIVLRNDAKNLYA-AGALAHKGYFREARDVFAQVREAT-------ADSDVWLNLAHIY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |