>PF15745 (280 residues) GGGSKYFRSSTVGEHTTIEFENLVDSDEGESSQSCPRPISEEEIGHLKELRYGAITDKQT LIDEKLTAELVAQEEKLRLEEEAICAAQREAAKLAKERKLKEQLAQRSRARVEAEGSGTH RKHRPSDGEFEVYLQSVKAQSEAFRSSRLSSETNVVTPNTESSWDFTSKTRSTNDDATSL DLEWEDEEGMNRMGPAWERSKTEEDILRAALCPGGRQLGSGPPSASEDSNALEWENDFVS AHAEDIGDHGDEEFEGFVNPVLDTPSEETEVKPITDQQDR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | GGGSKYFRSSTVGEHTTIEFENLVDSDEGESSQSCPRPISEEEIGHLKELRYGAITDKQTLIDEKLTAELVAQEEKLRLEEEAICAAQREAAKLAKERKLKEQLAQRSRARVEAEGSGTHRKHRPSDGEFEVYLQSVKAQSEAFRSSRLSSETNVVTPNTESSWDFTSKTRSTNDDATSLDLEWEDEEGMNRMGPAWERSKTEEDILRAALCPGGRQLGSGPPSASEDSNALEWENDFVSAHAEDIGDHGDEEFEGFVNPVLDTPSEETEVKPITDQQDR | |||||||||||||||||||
1 | 3jc8Na | 0.09 | 0.07 | 2.60 | 1.22 | SPARKS-K | ----------------------MMIRINLLPVRAVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMMDA----------------------------LASATPKKVWVKTFSENNN--AVSIDGSAVSHDEVAEFMVVWTPKGMGRLVDRRRDSKTARVEMLTSDATIEEFPEAQVSPFFKNIDTAKQVGGAQVGVPILVEFKITMTSNY------------ | |||||||||||||
2 | 2tmaA | 0.11 | 0.10 | 3.76 | 1.72 | Neff-PPAS | -------AIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELD-KYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTK-LEKSIDDLEDELYAQKLKYKAISEELDHALN | |||||||||||||
3 | 2mxxA | 0.08 | 0.05 | 2.09 | 1.07 | PROSPECTOR2 | MADEA----------------TDAARNNDGAYYLQTQFTNADKVNEYLAQHDGEIRAEAAADPAVVAAKAALDAVEGGSHNYGEVKAAYEAAFNNAFNAVRNKYVQRFQATYNNATEQEGKTYIQGET-------------PEQANARYLKRVGAANNQNPAAEDKGATTPASKEEAKK----------------------------------SEAAAKNAGKAAG--------------------------------------KALPKTSAVKHHHHHH | |||||||||||||
4 | 5yfpE | 0.09 | 0.08 | 3.04 | 1.19 | SPARKS-K | ELSKDHRNDVLIDAN-----TKNLPTNEKDQDAIIWKQLDPKPYIRTFESTLKELKNLNEETLNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVPLGDKLETAIKKK-----QNYIQSVELIRRYNDFYSMGKSDIVEQLRLSKNWKLNLLILSSKLETS------SIPKTINTKLVIKYSEMMENELLENFNSAYRENNFTKLNNFNGGVNVIQS---FINQHDYFIFIKNVKFKEQ-----LIDFENHSVIIETSMQNLI | |||||||||||||
5 | 5araT | 0.14 | 0.06 | 2.07 | 0.79 | FFAS-3D | ----------------------------------------DKLNEQKIAQLEEVKQASIKQIQDAIDME--KSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYR-------------------EVKNRLDYHISVQNMMRQKEQEHMINWVEKRVVQSISAQQEKETIAKCIADLK--------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5lj5t | 0.14 | 0.12 | 4.01 | 0.39 | HHpred | --------------RTI--FESLLEKDTGNDPI-TNEPLSIEEIV------PNLLTSLQNEWDAIMLENLRSTLDSLTKKLTVMYAAKLVAAQLLMEKNEDSKDLPKSSQQ---APKW-----PILKN-L--ELLQ--AQNY-SRNIKFPELNKSMDKWVCMCRCEDGALFLKD-SKTTTTTPNPRTGEHPAII--S--RGPCNRLLL-LYPGNNKEIEVDS---ANEIIYMYGHNTFIWADNRGTIEDDSYIVHKSDVEYSSGKDSLLLALYSPDG--- | |||||||||||||
7 | 5nnvA | 0.11 | 0.09 | 3.32 | 0.97 | MUSTER | -----------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEA----VFETLQAEVKQLRAQVKEKQQLSNE--LTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRI--------------QHGLDTYERELKEKRLYKQKTTLL--------- | |||||||||||||
8 | 2j68A | 0.07 | 0.03 | 1.03 | 0.51 | CNFpred | -----------------------------------------TAKKELVKHLPQVAHEQSQVVYNAVKECFDSYEREVSKRINDDIVSRKSELDNLVKQKQTREINRESEFNRLKNL----------QEDVIAQLQKIEAAYSNLLAYYSHH--------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2pffB | 0.18 | 0.16 | 5.36 | 0.76 | HHsearch-2 | --MDA-----YSTRPLTGSLEHVQEQFNKILPEADDEPTTPAELVGKGYVSSLVEPSKVGQFDQVLNLCLTEFEELIKNYITARIMAKRPHVLVGDLIKFSATLSELINILEWLEN-P----SNTPDKDY---LLSIPAHYVVTAKGELRSATGHSQGAETDSWESFVSVRNTSLPPSILEDSLENNEGVPS--PMLSISNLEQDYVNKTHLPAGKQVEISLVNGAKNLVNLTLRKAKAPSGLDQSRI---PFSEKFSNRFLPVPFHSHLLVPASDLINK | |||||||||||||
10 | 5nnvA | 0.09 | 0.07 | 2.84 | 1.41 | Neff-PPAS | ----------------------------------------------------KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEE-AIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLALKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |