>PF15671 (270 residues) AAGDKKRPPERSEGHLSSSWPSATLKRPPARRGPGWNRTQPPAPPGVSPQTSPGRARAPA TCATPRTTGSGYSPARTRTTYAATSAGTGTTAAGTSSGPGARPDAAARFSLSLTPEAVLV IQRRHLEKQLLARPRRPFPSPSTEPRRLLAPCPRARAAGSRRSGPASDPDTTPAAGLGRL APRPRAPLLTGGLQVPQLSPRSGSLRPVLKVSLLNERHRYDDVEYEEEEAEALDEGLVRK CTEWLRGVESAAASRDRAGALDARPHMSTL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | AAGDKKRPPERSEGHLSSSWPSATLKRPPARRGPGWNRTQPPAPPGVSPQTSPGRARAPATCATPRTTGSGYSPARTRTTYAATSAGTGTTAAGTSSGPGARPDAAARFSLSLTPEAVLVIQRRHLEKQLLARPRRPFPSPSTEPRRLLAPCPRARAAGSRRSGPASDPDTTPAAGLGRLAPRPRAPLLTGGLQVPQLSPRSGSLRPVLKVSLLNERHRYDDVEYEEEEAEALDEGLVRKCTEWLRGVESAAASRDRAGALDARPHMSTL | |||||||||||||||||||
1 | 5jcss | 0.09 | 0.09 | 3.50 | 1.25 | SPARKS-K | HQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPSIYMNTKFISLNKGAHTRVVSVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSAADCFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSRAVLLKEKLNIQKKSMNSTLFAFTNHSLRSVCIQMTEPVLLVGETGTAKMLAKKLTVINVSQQTETGDVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYK | |||||||||||||
2 | 2nbiA | 0.15 | 0.15 | 4.97 | 1.11 | MUSTER | DLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRPD---CDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTP-QPSTPTVITSPAPSSQPSQCAEVIEQCPIDELPYGDSSRPLDCTDPAVNR---PDCDVL--NCPACCAFECRPDNPGSPPICSTM | |||||||||||||
3 | 2tmaA | 0.09 | 0.09 | 3.36 | 1.77 | Neff-PPAS | QAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQ-----------KDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEHALNDMTSI | |||||||||||||
4 | 4k0mC | 0.12 | 0.08 | 2.90 | 1.38 | PROSPECTOR2 | KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAA-----------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------------------------------AAAAAAAAAAAAAAA | |||||||||||||
5 | 5yfpH | 0.11 | 0.10 | 3.71 | 1.07 | SPARKS-K | IDQERMRRDRSSVLILEKFW--DTELDQLFKNVEGAQKFINSTKGRHILMTTTGKPLQMVQIADKSRDKQNDFIVSQCYPLKDV-----TVTQEEFSTKRFSNSNSSLYECR----------DADECSRLLDVIRKAKDDLCDIFHVEEENSKRIRESFRYLQSTQQTPGRENNRSPNKNKRRSMG-----GSITPDMSSTAQRLKFLDEGVELARL-RFESESQLEDLSLMLLNLISLKIEQRREAISSKLSQSLSSNEIVHLKSGTEN | |||||||||||||
6 | 2xd8A | 0.10 | 0.08 | 2.90 | 0.53 | FFAS-3D | ATDKYALYLKLFSGEMFKGFQHETIARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPILGNADKAPP--VAEKTIVMDDLLISSAFVYDLDETLAHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSATNFVEPGGTQIRVGSGTNESDAFTASALVDEKGVSSQGRCAVLNPRQYYALINGLVNRDVQGSSGNGVIEIAGIHIYKSMN---------------------------------------------------- | |||||||||||||
7 | 6fszJJ | 0.13 | 0.09 | 3.08 | 0.42 | HHpred | ----RRKRLADGLSVTQ-----KVFVR--SRNGGATKIV----REH--------YLRSDIPCLS---------RSC--TKCPQIVVPQNELPKFISDPLELSAPIGKHYVV--LDTNVVLQAIDLLENPN------CFFD-------VIV-PQIVLDEVRNKS----Y---------------PVYTRLRTLCRDS------DDHKR--FIVFHNEFSEHTFVERLPNETNDRNNRAIRKTCQWYSEHLKPNLNREAATK---------- | |||||||||||||
8 | 6fmlG | 0.11 | 0.11 | 3.84 | 1.11 | MUSTER | GRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPD------HDKQRFTNITVPSMARFVTDSGKLAKLDELLRELKEG----GH-----VL-MTRMI | |||||||||||||
9 | 4fm9A | 0.20 | 0.06 | 1.90 | 0.44 | CNFpred | ---------------------------------------------------------------------------------------------------------TVKFVVKMTEEKLAEAERVGLHKVFKLQTSL----------------------------------------------------------------------TCNSMVLFDCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKL-------------- | |||||||||||||
10 | 2v27B | 0.14 | 0.10 | 3.27 | 0.51 | HHsearch-2 | KLNPTDRIPQLDPALIEKKFPVATFIRSREEMD----YL-----------------QEPDIFH----EIFGHCPLLTNSSFANYTEAYGKM------------------GLNATKEQRVFLARLYWFTI------------------EFGLLDTP--------KGLRIY----GGGVLSSP---------GETDYADVDRKPFDILDVL-----R--TPYRIDIMQPI-YYMLVSDLDEIRKDDIMELVAQAEALGLHEAKFPVKKASLE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |