>PF15610 (264 residues) PYTYSLHKIHHSNNFGFSADDYSRFKFGDDRVAKKFGKDLADGFIKGFLEDNQISEQIVV ISSPYCFIPTATFAMKNYFVYQLNHWLVENGRMVVQEAKVHRTITYKDDYGALSAEDRIK LIGNDSFHIDKDFLRDKVLFFLDDIKITGSHEKMILKMVKEYELKNDIYMLYFAELANHD IHPNIENHLNYHKVRSVFDLDEIIKSGNFCFNTRIVKYILNCDFNSFSIFLERQTEDFIY NLYNLSLGNSYHTIDCYSGNLNFL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | PYTYSLHKIHHSNNFGFSADDYSRFKFGDDRVAKKFGKDLADGFIKGFLEDNQISEQIVVISSPYCFIPTATFAMKNYFVYQLNHWLVENGRMVVQEAKVHRTITYKDDYGALSAEDRIKLIGNDSFHIDKDFLRDKVLFFLDDIKITGSHEKMILKMVKEYELKNDIYMLYFAELANHDIHPNIENHLNYHKVRSVFDLDEIIKSGNFCFNTRIVKYILNCDFNSFSIFLERQTEDFIYNLYNLSLGNSYHTIDCYSGNLNFL | |||||||||||||||||||
1 | 1gph11 | 0.12 | 0.09 | 3.20 | 1.14 | SPARKS-K | ------------------SICSMEYIYFSRPNVHSARKNLGKMLAQESAVE-----ADVVTGVPDS-----SISAAIGYAEATG--------IPYEL-GLIKNRYVGRTFIQPSQALREQG-VRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGAT-EVHVKISSPPIAHPCTSTHEELIASSH--SVDEIRQEIGADTLSFL-------------SVEGLLKGIYDDSNCGQCLACFTGKY------------- | |||||||||||||
2 | 1gph11 | 0.15 | 0.11 | 3.70 | 1.60 | FFAS-3D | --------------------SMEYIYFSRHSARKNLGKMLAQE---------SAVEADVVTGVPDSS-------------ISAAIGYAEATGIPYEL-GLIKNRYVGRTFIQPSQALREQGVRMKL-SAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPCFYSTHEELI--ASSHSVDEIRQEIGADTLSF----------LSVEGLLKGIGRKYDDSNCGQCLACFTGKY------------- | |||||||||||||
3 | 1gph1 | 0.15 | 0.12 | 4.22 | 2.98 | HHpred | -EGMKSERFSMNINRSICSEYIYFNIDGIHSARKNLGKMLAQESA---------VEADVVTGVPDSSI-----SAAIGYAEATG--------IPYEL-GLIKNRYVGRTFIQPSQALREQGV-RMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGA-TEVHVKISSPPIAHGITSTHEELIASS--HSVDEIRQEIGADTLSF-------------LSVEGLLKGIGRKSNCGQCLACFTGKYPTEDTVLPHVKEA | |||||||||||||
4 | 1ecgB2 | 0.19 | 0.16 | 5.15 | 1.44 | MUSTER | ------SNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWE----DLDIDVVIPIPE-----TSCDIALEIARILG---KPYRQGFVKNRYVGRTFIMPGQQL-------RRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYPSATELIAH---REVDEIRQIIGADGLIF----------QDLNDLIDAVRAENPD-IQQFECSVFNGVYVTKDVDQGYLDFL | |||||||||||||
5 | 1gph1 | 0.14 | 0.11 | 3.87 | 1.17 | CNFpred | -----------------CSMEYIYFSRPDSNNVHSARKNLGKMLAQESA-----VEADVVTGVPDS-----SISAAIGYAEATGIP---------YELGLIKNRYVGRTFIQPSQALREQGV-RMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGA-TEVHVKISSPPIAHPCTSTHEELIASS--HSVDEIRQEIGADTLSFL-------------SVEGLLKGIGRKYDCGQCLACFTGKYPTEIYQDTVLPHV | |||||||||||||
6 | 1gph1 | 0.15 | 0.12 | 4.22 | 1.84 | HHsearch-2 | DEGMKSERFSMNINRSICSEYIYFNIDGIHSARKNLGKMLAQESA---------VEADVVTGVPDSSI-----SAAIGYAEATG--------IPYEL-GLIKNRYVGRTFIQPSQALREQGV-RMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGA-TEVHVKISSPPIAHGITSTHEELIASS--HSVDEIRQEIGADTLSF-------------LSVEGLLKGIGRKSNCGQCLACFTGKYPTEDTVLPHVKEA | |||||||||||||
7 | 1ecgB2 | 0.17 | 0.15 | 4.84 | 2.11 | Neff-PPAS | ------SNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWED----LDIDVVIPIPE-----TSCDIALEIARILG---KPYRQGFVKNRYVGRTFIMPGQQL-------RRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYPSATELIAH--GREVDEIRQIIGADGLIFDLNDLIDAVRAEN------------PDIQQFECSVFNGVYVTKDVDQGYLDFL | |||||||||||||
8 | 1ecgB2 | 0.15 | 0.13 | 4.31 | 2.58 | HHsearch | SNPCLFEYV----YFARPDSFIDISVYSARNMGTKLGEKIAREWE--------DLDIDVVIPIPETSC-----DIALEIARILG--------KPYRQ-GFVKNRYVGRTFIMPGQQLRRKSV-RRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGA-KKVYLASAAPEIRFGIMPSATELIAHG--REVDEIRQIIGADGLIF-------------QDLNDLIDAVRAEDIQQFECSVFNGVYVTKQGYLDFLDT- | |||||||||||||
9 | 1ecfa1 | 0.15 | 0.12 | 4.22 | 1.40 | PROSPECTOR2 | NPCLFEYVYFARPDSFIDKISVYSARV---NMGTKLGEKIARE--------WEDLDIDVVIPIPETS-----CDIALEIARIL--------GKPYR-QGFVKNRYVGRTFIMPGQQLRRKSV-RRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKK-VYLASAAPEIRFIDMPSATELI--AHGREVDEIRQIIGADGLIF-------------QDLNDLIDRAENPDIQQFECSVFNGVYVVDQGYLDFLDTQ | |||||||||||||
10 | 1ecgB2 | 0.15 | 0.11 | 3.69 | 1.68 | SAM | ------------------------SVYSARNMGTKLGEKIAREWED--------LDIDVVIPIPETSC-----DIALEIARILG--------KPYRQ-GFVKNRYVGRTFIMPGQQLRRKSV-RRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGA-KKVYLASAAPEIRFIDMPSATELIAHGR--EVDEIRQIIGADGLIF-------------QDLNDLIDAVRAPDIQQFECSVFNGVYVT----------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |