>PF15578 (268 residues) HPIYVRRDPSIPTYGLRQSILLNSRLQDCYVDSPTLTNIWTARTCAKQNSNAPAPGTTSS WEVVKNPFIASSLSLVKLVLRRQLKDKCCPVPCKFGEAKPSKGLKPKDDSAMKATRRGRI RNSIRSKSKQPVGQQLGSPRRRRPAGGISESKESSKEKKVTVSQDLENRYAEHVAATQAL RRDIGTAAWKGQALLPEARKRQQLSDMLTIHGLPTEGYRALYHAVVEPMLWNPSGTPKRY SLELGKAIKQKLWEALCSQAATPXGAQK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | HPIYVRRDPSIPTYGLRQSILLNSRLQDCYVDSPTLTNIWTARTCAKQNSNAPAPGTTSSWEVVKNPFIASSLSLVKLVLRRQLKDKCCPVPCKFGEAKPSKGLKPKDDSAMKATRRGRIRNSIRSKSKQPVGQQLGSPRRRRPAGGISESKESSKEKKVTVSQDLENRYAEHVAATQALRRDIGTAAWKGQALLPEARKRQQLSDMLTIHGLPTEGYRALYHAVVEPMLWNPSGTPKRYSLELGKAIKQKLWEALCSQAATPXGAQK | |||||||||||||||||||
1 | 2pffB | 0.22 | 0.20 | 6.24 | 1.39 | HHsearch-2 | ----------MDAYSTRPLTLSHGSLEHVLLVP---TASFFIASQLQEQFNKILPEPTEGFAADDEPTTPA--ELVGKFLG---YVSSLVEPSKVGQFDQAKLLQENDTTLVKTKE--LIKNYITIMAKRPFDKKSNSALRAVGEGTDDYFEELRQTYHVLV-GDLIKFSAETLDAEKVFTQGLNILEWLEN---PSNTP---DKDYLLIISCPLIGVIQLAHYVVTAYLKGATGHSQSFFVSVRKAITVLFFIGVRCYEAYPNTSLP | |||||||||||||
2 | 2tmaA | 0.10 | 0.09 | 3.33 | 1.14 | Neff-PPAS | ---------------------IKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKS-LEAQAEKYSQKEDKYEEEI-KVLSDKLKEAETRAEFAERSVTK | |||||||||||||
3 | 2pffB | 0.20 | 0.16 | 5.15 | 1.10 | HHsearch | ----------MDAYSTRPLTLSHGSLEHVLLVP---TASFFIASQLQEQFNKILPEPTEGFAADDEPTTPA--ELVGKFLGY---VSSLVEPSKVGQFDQVLCLTEFENCYLE---GNDIHALAA-KL----LQE--------NDTTLVKTKELI-------KNYITAR----IMAKRPFDKKSNSALFRA---VGEGNAQQNTDDYFTYHKFSAETLSELIRTTILEWLENPSNTPKDYLLSIPISCPLIGVIQLAHYVVTAKLAT- | |||||||||||||
4 | 3j3iA | 0.13 | 0.12 | 4.29 | 0.91 | SPARKS-K | ANIRI-EHHKMPTGAFTTRWVLTPRVRECDFNPTMNLKAAGPKARLSGVKSRRRVSEVPLAHVFRSPPRRESTTTTDDSPRWLTREGPQLTRRVPIIDEPPAYESGRSSSPVTSSISEGTSQHEEEMGLFDAEVIATEARRRLGRGTLERIQEAAGEVTAEKNRRIE--AMLSARDPQFTGREQITKMLSDGGLGVREREEWLELVD------KTVGVKGLKEVRIDGIREGFAVVRTLLSSKHVRRINQLIRESNPSAFETEASRM- | |||||||||||||
5 | 1lxlA | 0.16 | 0.11 | 3.62 | 0.51 | FFAS-3D | ----------------------------------------------------------------------SNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESE---------METPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDE---FELRYRRAFSDLTSQLHITPGTAYQSEQVVNELFRDGVNWGRIVAFFALCVESVDKEMQVLVSRIAAWMATYLNDHLWDTFVELYGNNAAAES | |||||||||||||
6 | 2pffB | 0.21 | 0.18 | 5.71 | 0.44 | HHpred | ----------MDAYSTRPLTLSHGSLEHVLLVP---TASFFIASQLQEQFNKILPEPTEGFAADDEPTTPA--ELVGKFLGY---VSSLVEPSKVGQFDQAKLLQENDTTLVKTLIKNYITARI--MAKRPFDKKSNSALFR-------AVGEGNAQLVAIYFEELRDLYQYHVDAEKVFTQGLNILEWLEN------PSNTPDKDYLLIISCPLIGVIQLAHYVVTAYLKGATGHSQSFFVSVRKAITVLFFIGVRCYEAYPNTS-- | |||||||||||||
7 | 1kanA | 0.13 | 0.11 | 3.90 | 0.77 | MUSTER | GPIIMTREE---RMKIVHEIK--ERILD--KYGDDVKAIGLGRQTDGPYMSTEEAEFSHEWTTGEWKVEVNFYSE---ILLDYASQVESDWPLTHGQFFSILPIYDSGGYLEKVYQTAKSVEAQKFHDAICALIVEELFEYAGKWRNIRVQGPTT--------------FLPSLTVQVAMAGAMLIGLHHRICYTTS---ASVLTEAVKQSDLP-SGYDHLCQFV---MSGQLSDSEKLLSLE---NFWNGIQEWTERHGYIVDVSKR | |||||||||||||
8 | 2pffB | 0.23 | 0.21 | 6.57 | 0.68 | HHsearch-2 | EPTTPAVEPSKVGQFDQVLNLCLTEFENCYLEGELIKNYITARIMAKRPF--DKKSNSALFRAVGNATDDYFEELRDLY---QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLGFTPGELRSYLKGATGHSQGLVT----AVAIAETDSWESFFVSYEANTSLPPSILEGVPSPMLSISNLTQEQVQDYVNKQVEISLVNGAGPPSLYGLNL------TLR-----KAKAPSGLDQ | |||||||||||||
9 | 1dgiR | 0.13 | 0.12 | 4.18 | 0.98 | Neff-PPAS | ------QAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNKVEHESFEKPQLLTVNLPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQ-------LLIRPVDKPINTT | |||||||||||||
10 | 6etzA4 | 0.16 | 0.05 | 1.74 | 0.51 | HHsearch | ---------------------PAAGIDDVFVH-----------------------------------------------------------------------------------------AGY---------------------------DHITGEGILKVEASRGGQA----IDAVVR--V------------PE--------LA--L-E---LAA-GTEVRVPAVEPWSA-EVPKLYEAAVSAAG---------ESVALQIGFR- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |