>PF15573 (258 residues) ISNNIWFGQPSSSSPSTIKENLLRATTEHEALFHLIELFKLGDFTQKRLLFQLMNYTNDE ALLNLCIRVFCSISTHEDLRDSNHLLFLGEGNKAAVDTFASEAITTLSLEVIPYLMALLE EWDSIRDTSVMIRDSIDCFINFKEHLGDNATVDEIGEYYKDFMEDCDAGQYYYHQNLSFL GDLTKILMQRVFIAANHEQMLRMELIPSLLSTWSGEKVPGDYHTIITSENYKDYVSYVKG LANRKWEKGQKYFYGHLL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | ISNNIWFGQPSSSSPSTIKENLLRATTEHEALFHLIELFKLGDFTQKRLLFQLMNYTNDEALLNLCIRVFCSISTHEDLRDSNHLLFLGEGNKAAVDTFASEAITTLSLEVIPYLMALLEEWDSIRDTSVMIRDSIDCFINFKEHLGDNATVDEIGEYYKDFMEDCDAGQYYYHQNLSFLGDLTKILMQRVFIAANHEQMLRMELIPSLLSTWSGEKVPGDYHTIITSENYKDYVSYVKGLANRKWEKGQKYFYGHLL | |||||||||||||||||||
1 | 6fsqA | 0.08 | 0.07 | 2.74 | 0.77 | SPARKS-K | AAAYALGKIGDERAVEPLIKAL-KDEDAWVRRAAADALGQIGDERAVEPLIKALK-DEDGWVRQSAAVALGQIGDERAVEPLIKAL--KDEDWFVRIAAAFALGEIGDERAVEPLIKALKD--EDGWVRQSAADALGEIGG-----------ERVRAAMEKLAETGTG----------FARKVAVNYLETVEMYIKNLQDDSMPVRYDAADALGKIG---------DERAVEPLIKALKDEDPNVRASAADALGKIGD | |||||||||||||
2 | 3ltjA | 0.09 | 0.06 | 2.19 | 1.14 | FFAS-3D | ------HHHHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKD-EDAWVRRAAADALGQIGDERAVEPLIKALALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKD--EDGWVRQSAADALGEI-----------GGERVRAAMEKLAETGT-----------------GFARKVAVNYLET------------------------------------------------------------- | |||||||||||||
3 | 5n3uA | 0.09 | 0.07 | 2.83 | 0.51 | HHpred | ----EEFPAEPQLTPELAIANL-QSSDLSLRYYAAWWLGKYRVSAAVDALIAALEDEADYPLRRNAARALGKLGNRKAVPGLIN--CLECPDFYVREAAAQSLEMLKDKTAAPALIKLLDGGVAQVQPYEAVLEALGAIGATDAFLEH-PV-SRVQCAAARAMYQLTQ-----------EP----VYGELLVKVLAGNDLNLRRVALGDLGAIGYLAAEAIANA-KAENSFIALKGLLEHQMS--------------- | |||||||||||||
4 | 2vglB | 0.11 | 0.10 | 3.75 | 0.66 | MUSTER | LSN---YNPKDDREAQSICERVTPRLSNSAVVLSAVKVLMKKDSDYYNMLLKKLAPPGEPEVQYVALRNINLIVQKEILKEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVD-VDFVRKAVRAIGRC--AIKVEQSAERCVSTLLDLIQTKVN--YVVQEAIVVIRDIFRKIIATLCENLDSLD--EPDARAAMIWIVG------EYAERID-NADELLESFLEGFHDESTQ--VKLFLKKPS | |||||||||||||
5 | 4d4zA | 0.08 | 0.07 | 2.60 | 0.87 | CNFpred | -------------EVDAIGQTLVDPQPLQARFRALFTLRGLGGPGAIAWISQAFD-DDSALLKHELAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSD--PVIEVAETCQLAVRRLEWLQ-YLSVDPAPP-DVGRLREALLDESRPLFERYRAMFALRNAGEEAALALAEGLHCGSALFRHEVGYVLGQLQ------------HEAAVPQLAAALARCTE--------------- | |||||||||||||
6 | 4d4zA | 0.10 | 0.09 | 3.27 | 0.53 | HHsearch-2 | ----GPLGSMVTEQVDAIGQT-LVDPKQQARFRALFTLRGLGGPGAIAWISQAFDD-DSALLKHELAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSSD-PVIE-VAETCQLAVRRLEWYLPPLDESRPLRYRAEAALALAEGLHCG-------SALFRHEVGYVLGQLQH------E---AAVPQLAAALARENPMVRLGAIARPACLAALQAHADDPDMYEHE----------- | |||||||||||||
7 | 4d4zA | 0.09 | 0.08 | 3.16 | 0.83 | Neff-PPAS | --------MVTEQEVDAIGQTLVDPQPLQARFRALFTLRGLGGPGAIAWISQAFDD-DSALLKHELAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSS--DPVIEVAETCQLAVRRLEWLQQHGGEPPAEERDVGRLREALLDESRPLFERYRAMFALRNAGEEAALALAEGLHCGSALFRHEVGYVLGQLQHEAAAALARCTENPMVRHECAEALGAIARPACLAALQAHADDPE | |||||||||||||
8 | 5n3uB | 0.06 | 0.03 | 1.32 | 0.78 | HHsearch | ----------DVAAIPTLIATQIDDYNYGARAYSIRTLAAIADPRALDVLIDAAATDFAPSVRRAAAKGLGNLHPKKALETLLFI--SQDAEWSIRYAAIVGLQGLVNIPIHTRLKEMLASDAEKA-VRARILLAQS------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4d4zA | 0.07 | 0.06 | 2.56 | 0.94 | SP3 | PLGSM----VTEQEVDAIGQTLVDPKQPLQARFRALFTLRGGGPGAIAWISQAF-DDDSALLKHELAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGDPEVLEILKQYSS--DPVIEVAETCQLAVRRLEPYLSVDPAPPAEERDVGRLREALLDESRPLFERYRAMFALRNAGEEAALALAEGLHCGSALFRHEVGYVLGQLQ------------HEAAVPQLAAALARCTENP-----------MV | |||||||||||||
10 | 5mu7A | 0.11 | 0.11 | 3.88 | 0.82 | PROSPECTOR2 | PCPKLDSQGKLKQEFILVCNGIRQHPNEYIRGNTLRFLCKLREPELLEPLLSSVREHRHAYVRKNAVFAVASIYQHAPAADLIATFLEGESDPTCKRNGFAALSSISHDKALSYLGTVFEGIPNAEQNKPRYLRLIFDLLEANTSTNNPVAVKAAAGKFIELAIKEAD------------NNVKLIVLDRVDQLRQKNEGILDDLIMEILRVLSSPDIDEMVSSKNVEEVVLLLKKELSKTVEQEYEKNSEYQCAVKF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |