>PF15546 (261 residues) MFAVQPGPPEPPFLGGPPASVSQHDYEPDSNSNFVTSTYDANENWSRALAGARASDLGGR ELTLTQNLPSDNQAVLGKRQPSAPGLLGSPPDDFFLPTVGEIRSPPEGAELPMAAGPKPE KDVRVEATAAAGSPLEDVGYASSSLSVDSPDSSPGPSWDTFSPCPGPPDPGPAPDTFLPT VTQAVQQLLARERYKEQEKEKHHVHLVMYRRLALLQWIRGLQCRLAGQQARLQESFDTIL DNRKELIRGLQQGLPPRPQDR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MFAVQPGPPEPPFLGGPPASVSQHDYEPDSNSNFVTSTYDANENWSRALAGARASDLGGRELTLTQNLPSDNQAVLGKRQPSAPGLLGSPPDDFFLPTVGEIRSPPEGAELPMAAGPKPEKDVRVEATAAAGSPLEDVGYASSSLSVDSPDSSPGPSWDTFSPCPGPPDPGPAPDTFLPTVTQAVQQLLARERYKEQEKEKHHVHLVMYRRLALLQWIRGLQCRLAGQQARLQESFDTILDNRKELIRGLQQGLPPRPQDR | |||||||||||||||||||
1 | 6d4hA1 | 0.07 | 0.07 | 2.94 | 1.15 | MUSTER | HLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSTQKVLSFTTTTLDDILKSFSDVS---VIRVASGYLLMLAYACLTML---RWDCSKSQGA | |||||||||||||
2 | 2tmaA | 0.07 | 0.07 | 2.72 | 1.25 | Neff-PPAS | NALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKED---------KYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYK | |||||||||||||
3 | 2kr0A | 0.14 | 0.14 | 4.81 | 1.29 | PROSPECTOR2 | MTTSGALFPSLVPGSRGASNKYKGTTTDDSLIHFCNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPNVPAGPAGGQQVDLAEIMAPILANADVQERLLPADEIQF----QQALGMFSAALASPLMCQFGLPAEAVEAANKDVEAFAKAMQNNAKPEQKEG | |||||||||||||
4 | 5yfpH | 0.11 | 0.11 | 3.87 | 0.99 | SPARKS-K | VLDQCTKIAEKRLQLQDQIDQERMRRDR-------SSVLILEKFWDTELDQQKFINSTKGRHILMNSILNDLVLIADKSRDKQNDFIVSQCYPLKDVTVTQEEFSTKRLLFKFSNSNRDADECSRLLDVIRKAKDDDIFHVEESFRYLQSTQQTPGRENNRKRRSMGGSITPDMSSTAQRLESAVETLLDIESQLEDLLNLISLKIEQRREAISSKLSQSILKSGTENMIKLEQALDLFLQNRSNFIQDLILQIVDNPTNY | |||||||||||||
5 | 4mvdB | 0.09 | 0.07 | 2.75 | 0.61 | FFAS-3D | --------------------------------------------------RQPAPFSDEIEVDFSKPYVRVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVSDELTHNFKGFTVMNENERYDAVQHCRRNAPWTLTPEFLAEHRIDFVQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSREFIGFLEMFGP------ | |||||||||||||
6 | 5ijnF | 0.15 | 0.11 | 3.74 | 0.41 | HHpred | -------------------------------------------KWNQLQAFWG-TGDGLVVLVFNK--KETE--IRSQQQQLVESLHKVLGGQTLTVNVEGTKTLPDDQTVVIYV-----VERSPNGTSRRVPATTLYAHQLQQLGVTLPAQVDPIIWEQAK------VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIIEDISELQKIAQYKRKLMDLSHRTLQ-----VLIKQEIQRK--SGYAIQAD-- | |||||||||||||
7 | 2z6bA | 0.10 | 0.10 | 3.64 | 1.07 | MUSTER | LYGGIVREKPNRLEGSDPTGQYPRRLGNDTNVL-VGYDSSSNVIQDSNLDTAINPDDRPLSEIPTDDNPNMSMAEMLRRDEGLRLKVYWDTEGY-----------PTIGIGHLIMKQPVRDMAQINKVLSKQVGREITGNPGSITMEEATTLFERDLADMQRDIKSHSKVGPVWQAVNRSRQMALENMAFQMGVGGVAKFNTMLTAMLAGDWEKAYKAGRDSLWYQQTKGRASRVTMIILTGNLESYGVEVKTPARSLLAM | |||||||||||||
8 | 2j68A | 0.14 | 0.05 | 1.56 | 0.55 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPKFMDSLNTFLTRERAIAELRQVRTLARLACNHTAVARRIPLLEQELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTI | |||||||||||||
9 | 5c3lA | 0.19 | 0.08 | 2.47 | 0.47 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------------------------------------------------SPVQIKQ-LIQNPLSGVDPWVDNPDPERLIPVPMIGFKELLRRLEVQDQMTKQHQSRLDISEDIGELQKIGQYKRKLMELSHRVLQV-----LIKQEIQRK--SGFAIQAEEE | |||||||||||||
10 | 5cwpA | 0.09 | 0.08 | 3.03 | 1.01 | Neff-PPAS | -----------------------------------SDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLE-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |