>PF15544 (271 residues) TSVVPQTRPNAANSAANEVALASNTQTKAQRTRGAGQSIKAWTEIRLTDERSGINPLTGR NLGGDGTYVINPQISATLGQNLADISDPTVFMGEQSLGGHVKLMVENPQTVRERSDGGFQ QIRFSARYHLKNSDSWQTPNMSLNMRAANTRALRGSVNADAPLKIAGVGVQGGAEIGGDN TTETSVEAAVDEFRLGGSTTYFDHWHDVEMVLNSSGYAVATVRDSNGRGQTNRPVFAQRV AAAERYDTQRGSKVTEHNASVPARVQMPLLR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | TSVVPQTRPNAANSAANEVALASNTQTKAQRTRGAGQSIKAWTEIRLTDERSGINPLTGRNLGGDGTYVINPQISATLGQNLADISDPTVFMGEQSLGGHVKLMVENPQTVRERSDGGFQQIRFSARYHLKNSDSWQTPNMSLNMRAANTRALRGSVNADAPLKIAGVGVQGGAEIGGDNTTETSVEAAVDEFRLGGSTTYFDHWHDVEMVLNSSGYAVATVRDSNGRGQTNRPVFAQRVAAAERYDTQRGSKVTEHNASVPARVQMPLLR | |||||||||||||||||||
1 | 3kogA | 0.11 | 0.08 | 2.94 | 0.67 | SPARKS-K | ----------------------------------TPVNAKFIITPVVIDATTGTDVAEISFSKGNGTYEGTPELASE---------SININAKYK---GTGSASVTIPALKA----GQFGAKEVTIILAQEESSNSQIETTKHSGFKNNT----SDYWYYITVTYTKKEGSEVIKNDYE-GDDSEIKNIIDAYNVTLNDVQVLAHSRFSVFVDYKTTSVYQIIEKSPDGNPVDSYNTIVSPKNEQIPGHGHAPSHGHGH------------ | |||||||||||||
2 | 2bk1A | 0.14 | 0.13 | 4.51 | 0.40 | FFAS-3D | ---VDDPTYGKVSGAIDELVSKWNEKYSSTNAKVLENSLGVDFNAVANNEKKVMLPKNPSDLFDDSV------TFNDLKQKGVSNEAPPLMVSNVAYGRTIYVKLE--------TTSSSKDVQAAFKALIKNTDIYENSSFTAVVLGGDAQEHNKVVTKDYPISYTSVFLKDNSVAAVHNKTDYIETTSTEYSHSGAYVAQFEVAWD-EVSYDKEGNEVLTHKTWDGNYQDKTAHYSTVI---PLEANARNIRIKARECTGLAEYDVPLTN | |||||||||||||
3 | 6fhwA | 0.16 | 0.08 | 2.69 | 0.36 | HHpred | -----------------------NRDTG-TPLSAIDLTWSYAAFITMSQRRAGQYPWGSRNASTPGIYTPATAAGAPNVTS-SCQVSITFNINATTYGE-LYVIGNSSDLGAWNIADAYAGEVISYQYVRQEDDIYETVNRTLTVPACGGATWMGPVGSSGN------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 1ucuA | 0.10 | 0.09 | 3.42 | 0.74 | MUSTER | TDILKQINSQTLG--LDTLNVQQKYKVSDTAATVTG-YADTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTYYAKVTVTGGTGKDGYYEVSVDKTNGEVTLAGGATSPLTGGLPATATEDVKNVQVANADLTEAKAALTAAGVTGTASVVKMSYTDNNGKTIDGGLAVKVGDYYSATQNKDGSISINTTKYTADDGTSKTA-------LNKLGGADGKTEVVSIGGK-------TYAASKAEGHNFKAQPDL---AEAAATTTENPLQK | |||||||||||||
5 | 3ljyA | 0.10 | 0.06 | 2.02 | 1.17 | CNFpred | -----------------------------------------IVKTNSK-------WLAAAKVSGNANFMVNSPLTGDE-TVIKANANSLVQLKETVTVGKLDLNVSG--ANMVVN----HLEADKIECDIDG-------SGSITIKKGNAKEGDYSIVSSGDIHAFGLAVP-------------QLSCKVTG----NGLAEVHATDNLKANVVGKGNIRYKG------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.14 | 0.13 | 4.31 | 0.93 | HHsearch-2 | SLVEPSKVG-QFDQVLNLCTEFENCYLEALLLQENDTTLVKTKELRIFDKKSNSALRAVGGN-AQLVAIFTDDYFEELDAEKLELENPSNTPDKDYLLSILAHKLGFTPGELRSYLKGATGHSVTAV-AIAETDSWES------FFVSVRKAFIGVRCYETSLENNEVPMLSISNL--TQEQVQDYVNKTNSHLPAGK------QVEISLVNGAKNLVVSGPPAKAGLDQSRIPFSERKLKFSNRFLPPFHSH-----LLVPASIQIPVYD | |||||||||||||
7 | 2bsgA | 0.06 | 0.06 | 2.58 | 0.80 | Neff-PPAS | --EVLDKNIGILKTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSSRLNEIDTKQTTVESDISAIKTSIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSAGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQG-DVQALQEAGYIPEAPRD | |||||||||||||
8 | 2k78A | 0.11 | 0.05 | 1.86 | 0.37 | HHsearch | -----------------------------------------------------------SAN-AADSGTLNYEVY--------KYNTNDTSIANDYFNKPAKYIKKN---------G-----KLYVQITVNHSHWIT--GMSIE--GHKENIISKNTAKD-ERTS-EFEVS-------KLNGKIDGKIDVYIDKVNGKPFKYDHHYNITYKFNGPTDVAG--------------------------------------------------- | |||||||||||||
9 | 5az4A | 0.07 | 0.07 | 2.78 | 0.53 | SP3 | LNIGTSSRNHGWNTKTQRAEDENDTGTTQFYTTSKNSVEVTEKGVDLFNAKGQGLNLRDGQVSYADATYSTNKVGVNAFDPNLQQNQTAAFWGTANQKVNLDITLNGVRIQNADIQSIDDAIAYINTFTAPTDTRDGTGVKAVKNKDGSGIDFVNDNADGTTDNMKNINLVVANTNTAGELWNAVWNNNNQTFTFNNNGNGQAGTP----TINKNGSSLWTATNITFTPQPPQAATNVQLTGGLNAQIITAHKYIYSSNPVDIGPMYNPDG | |||||||||||||
10 | 4uxeA | 0.07 | 0.07 | 2.89 | 0.93 | PROSPECTOR2 | FGGSLAANRTFTIRNTGAPTSIVFEKGPASGANPAQSSIRVWGNQFGGGSDTTRSTVFEVGDDTSHHFYSNINASGLNVNGTATFGRSVTANGEFISKSANAFRAINGDYGFFIRNDASNTYFLLTAAGDQTGGFNGLRPLLINNQSGQITINSGGLTVNSRIRSQGTKTSDLYTRAPTSDTVGFWSIVEKTNEVTGLPYLERGEETLTQFGNTLDSLYQDWITYPTTPEARTTRWTRTWQKTKNSWSSFVQVFDGGNPPQPSDIGALPSD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |