>PF15521 (264 residues) RHQQATQVLRNVFYLLHSQLELYAGKKNQGQYQLHTGNVAKVLSHGGRVNIRIPALGDSK ENPHALMEWLGITHEAGELDSHDAVFSRLAGTHHVRIGDNKAGQSGSFKETGGMMAAINA KLHFDHLMGMNLAVGGLGKKDFNGDVILPDGAHGHMFIGFREPTLKRDGVLQIGIETTEP GGFSTVGYIHNWRSSEKTANPVSSVGGLKKDKVGDGSKNARTIDLAKVGEGDWKKRLDEI RSHFEGKLSAAQDEQAQKEVFKEL |
![]() | |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RHQQATQVLRNVFYLLHSQLELYAGKKNQGQYQLHTGNVAKVLSHGGRVNIRIPALGDSKENPHALMEWLGITHEAGELDSHDAVFSRLAGTHHVRIGDNKAGQSGSFKETGGMMAAINAKLHFDHLMGMNLAVGGLGKKDFNGDVILPDGAHGHMFIGFREPTLKRDGVLQIGIETTEPGGFSTVGYIHNWRSSEKTANPVSSVGGLKKDKVGDGSKNARTIDLAKVGEGDWKKRLDEIRSHFEGKLSAAQDEQAQKEVFKEL | |||||||||||||||||||
1 | 4xhpA | 0.14 | 0.12 | 4.03 | 0.67 | SPARKS-K | NIQESAYFTSRSYLIANLLLGGFDTGNEKGNIESFAIPT---------VIAEAPPAKIKDEDIELL--HVRIISNSLDGDARSRAWYVGAYAKDQEDRQEPTVQKNK----KLHLIPLFTSMARIGKEEVSVPFSG-------GQIL--EMLYGEHTVEFLDGTYEGK-KIKITIND---GTMNVEGVSSVL------AILFDIVNGEIVEV--EGGESYAINDLGELNLSTTNKYIDEILKNIKERFMENEIIESREDFIQRL | |||||||||||||
2 | 3ksyA1 | 0.14 | 0.07 | 2.31 | 0.46 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------MNEIQKNID------------GWEGKDICCNEFIMEGHERHIFLF--------DGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEILKDENSVIFSAKSAEEKNNWMAALISLRSTLERMLDVTMLQEEKEE----- | |||||||||||||
3 | 2b5uA | 0.16 | 0.12 | 3.92 | 0.29 | HHpred | -----SAAIADIMAALFKFGLWVLPS---QIAKD-DPNM---M---SKIVTSLPA---------DDITESPVSSL---PLDKATVN------VNVRVVD--------DVKDERQNISVV------SGVPMSCPV------------VDPTERPG-V---FTAS-IPGAPVLNISVNNSTPAVQTLPGVTN-NTDKDVRPAGFT-QGGNTRDAFPKDSHNAVYVSVSDVLPDQVKQRQDEENRRQQEWDATHPVEAAERNYERA- | |||||||||||||
4 | 6nkeA | 0.09 | 0.08 | 3.03 | 0.67 | MUSTER | -----MTILKQMMRKLKNEKIHM--DPAAKSPDESAKIAKEAEMAGTDFIMVGGSTDIDERLMDQTVSAIKENTNLKFPGSSNMISRHADAIFFMSLLNSSDREFIV-----GHQVKASKFLSLLPMAYLVFSPGMTVGRVGKANLIDSFDRE---TALSYSLAAQYMGFKLIYFE-AGSGAPRPVSEDTISYVKSKINIPLIVGGGRDPETAMR-LAGADMIVTGSEKSNNVYSVLRNIIGKIKSIEIK-------------- | |||||||||||||
5 | 4lgyA | 0.11 | 0.07 | 2.48 | 0.65 | CNFpred | ----------NALLLIDLGK------------GHNALGATALAQVYRQLGDKPADVRDV-AQLKGFYDAMQALV------------RKLLAWHDRSD--------------GGLLVTLAEMAF-AGHCGVQVDIAALG-----DHLAALFNEELGGVIQVRAEDR-ADCVHYLGQALA--------GDRFVITAN----------------------QTVFSESRTTLR-VWWAETTWQMQRLRD-------NPQCADQEHEAK | |||||||||||||
6 | 2pffA | 0.19 | 0.18 | 5.85 | 0.62 | HHsearch-2 | KGSIGAEVLQGLL---QGGAKVVVTTSSKQVTDYYQSIYAKYGAKGST-LIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAEQGIELEHI-----DSKSEFRIMLTNIFNRWWNAKTYGISDDI--ISQVDPITEPVQNDSSSGPIK----TPVATSVESVDIGVETILSGKARIVGGYGNMKATSNTLEPIVAMAATATDKIGAPGTTARELNMKYRK-RQLVTREAQIKDWVENELEALKSEEAESQLRGAL | |||||||||||||
7 | 5hamA | 0.07 | 0.06 | 2.55 | 0.90 | Neff-PPAS | ----TENEITHLLTAQLDEKKFSVQPAITFRNTALTEEMLKDYTA------------KGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDI--LNRATKDIKDNGKEAAVIPIEMGYGHWTVLVAKYDKKDNQIILTFNDSLNSINYDGQKLPKLIDKTLGNLPNKPIIIDEQTKQQTDQAKGQAILSTEESKGEKGLRLREHHAQILTDAMFKQDAQWIRQQ----- | |||||||||||||
8 | 3uv1A | 0.11 | 0.07 | 2.61 | 0.34 | HHsearch | ITEEINKAIDDAIAAIEQ-------S---ETIDP-----------------KVPDHADK------FERHVGILDFKGEL-A-RNIEARGLKQKRQGDAN------VK-GEEGIV------------KAHLLIGVHDDIVSEYDLAYLGDLHPTTHVISDIQD------FVVALSLEIPDEGN---------IT---TS---------FEVRQ-----FANVVNHIGGLSILDPIVLSDVLTAIFQDTVRKE-TKVLAPAFKRE- | |||||||||||||
9 | 4dgkA | 0.08 | 0.08 | 2.97 | 0.62 | SP3 | FNPRDVEGYRQFLDYSR---AVFKEGYLGTVPFLSFRDMLRAAP-------QLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPTSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDLGGEVV---LNARTTGNKVHLEDGR------RFLTQNADSNSLFVLYFGLNHHHDQLAHHTVCFGPRLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLALGTANLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHR | |||||||||||||
10 | 5oacA | 0.08 | 0.07 | 2.75 | 0.89 | PROSPECTOR2 | MTIKCFTLIGVDDDSFASGSKNDYISDTPKFLDPSNVHIKATLKRGGKDYVLFSE-------NLALLAKYSTITQGRDQWEEGVKLAAKEMVHLVYIPFSGNTNWPAHINLKD---------NDVLEVYVNVVRGAYGAELDANRTSPSIGVEKFIPFMTSYSIRANQATDIALLSMTNDVSNIPNCIEDSVRSHANEVDSYLIHEDIKMNPAKIRENTIYLVRSHFQTSLEILQKAVAMEEKHQSADIAKVP---------AT | |||||||||||||
|
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |