>PF15499 (273 residues) CVQWKNAYALCWLDCILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTNQL SGVKDGDCKKLTSEIFAEIETCLNKVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLEP HIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGPCNNCNSKSQ IRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHFEGCLYQITSVIQYQANNHFITWILDAD GSWLECDDLKGPCSERHKKFEVPASEIHIVIWE |
![]() | |
|
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | CVQWKNAYALCWLDCILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTNQLSGVKDGDCKKLTSEIFAEIETCLNKVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLEPHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGPCNNCNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHFEGCLYQITSVIQYQANNHFITWILDADGSWLECDDLKGPCSERHKKFEVPASEIHIVIWE | |||||||||||||||||||
1 | 6dgfA | 0.15 | 0.14 | 4.81 | 3.17 | SPARKS-K | LAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRDNAHTALVEEFAKLIQTIWTS----SPNDVVSPSAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVDHLPD-DEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVTLMDCMRLFTKE----DVLDGDEKPTCCRCRGRKCIKKFSIQRFPKILVLHLKRIRTSKLTTFVNFPTNHAVYNLYAVSNHSGTGHYTAYCRSPGTGWHTFNDSSVTPMS---SSQVRTSDAYLLFYE | |||||||||||||
2 | 3i3tC | 0.15 | 0.14 | 4.84 | 2.59 | FFAS-3D | -VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEV-QELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFQQDAQEFLKLLMERLHLEINRRLSDDDRNLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVASSPVYQLYALCNHSGYGHYTALCRC-QTGWHVYNDSRVSPVSENQ---VASSEGYVLFYQ | |||||||||||||
3 | 2ibiA | 0.17 | 0.16 | 5.33 | 5.01 | HHpred | LAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLHHGSNAHTALVEEFAKLIQTIWTSSPNDVVSPSAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVTLRPKNPEHLPQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSEVTLMDCMRLFTKE----DVLDGDAAPTCCRCRGRKCIKKFSIQRFPKILVLHFSESRRTSKLTFVNFPNTHAVYNLYAVSNHSGMGHYTAYCRSPTGEWHTFNDSSVTPMS---SSQVRTSDAYLLFYE | |||||||||||||
4 | 3i3tC | 0.16 | 0.15 | 5.02 | 2.69 | MUSTER | HVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEV--QELTEAFADVIGALWHPDSCEAVNPTVPSFSGYSQQDAQEFLKLLMERLHLEIN---RRLSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFGKVSLRDCFNLFTKEEELESENAPVCDRCRQKRSTKKLTVQRFPRILVLHLNRFSASRGSVGVDFPLQRPVYQLYALCNHSGSGHYTALCRCQTG-WHVYNDSRVSPVSENQ---VASSEGYVLFYQ | |||||||||||||
5 | 5txkA | 0.13 | 0.12 | 4.29 | 2.29 | CNFpred | KIGLINLGNTSYVNSILQALFMASDFRHCVLRLTNNSQPLMTKLQWLFGFLEHSQRPAISPFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQKLK------------SSTSVEKMFGGKIVTRICCLCCLNVSS-SVLDLVNYFLS----PEKLTAENRYYCESCASLQAEKVVELSQGPCYLILTLLRFSFD-IPLLLRLPLRGQAYDLCSVVVHSGSGHYYCYARE-ENQWYLFNDTRVSFSSFESVSNVPKDTAYVLFYR | |||||||||||||
6 | 5jtvA | 0.15 | 0.14 | 4.55 | 1.24 | HHsearch-2 | YVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTSSKSVPLALQRVFYELQHS------DKPVGTKLTTLDSFMQHDVQELCRVLLDNVENKMKGT-------------------CVEGTIPKLFRGKMVSYIQCKEVDYRSKKNIFESFVDYVAV----EQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQFMYDPQTDINDRFEFPKDPANYILHAVLVHSGHGHYVVYLNPKDGKWCKFDDDVVSRCTKEEAIERHCTNAYMLVYI | |||||||||||||
7 | 3i3tC | 0.14 | 0.14 | 4.63 | 3.72 | Neff-PPAS | -VGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEV--QELTEAFADVIGALWHPDSCEAVNAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGSSPVYQLYALCNHSGYGHYTALCRC-QTGWHVYNDSRVSPVSENQVASS---EGYVLFYQ | |||||||||||||
8 | 5cvmA | 0.19 | 0.17 | 5.55 | 1.86 | HHsearch | YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYQKKKENLLTCLADLFHSIATQ---KKKVGVIPPKLDLFDNYMQQDAHEFLNYLLNTIADILQEEKK-----------------QELTWVHEIFQGTLTNETRCLNCETVSNTSITHCLRDFSNT----ETLCSEQKYYCETCCSKQAQKRMRVKKLPMILALHFKYMEQTKLSYRVVFPNLDRMYDLVAVVVHCGNGHYITIVKSHG-FWLLFDDDIVEKIDAQAIEEFNSESGYILFY- | |||||||||||||
9 | 2hd5A | 0.15 | 0.15 | 4.91 | 3.22 | PROSPECTOR2 | LAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRSNAHTALVEEFAKLIQTIW----TSSPNDVVSPSAPRFVGYNQQDAQEFLRFLLDGLHNEVNR--VHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSAVTLMDCMRLFTKE----DVLDGDEKPTCCRCRGRKCIKKFSIQRFPKILVLHLKRIRTSKLTTFVNFPTNHAVYNLYAVSNHSMGGHYTAYCRPGTGEWHTFNDSSVTPMSSS---QVRTSDAYLLFYE | |||||||||||||
10 | 5jtvA | 0.15 | 0.14 | 4.53 | 3.21 | SAM | -VGLKNQGATCYMNSLLQTLFFTNQLRKAVYMGDDSSKSVPLALQRVFYELQHS------DKPVGTK---LDSFMQHDVQELCRVLLDNVENKMKG-------------------TCVEGTIPKLFRGKMVSYIQCKEVDYRSKKNIFESFVDYVAV----EQLDGDNKYDAGEHG-LQAEKGVKFLTLPPVLHLQFMYDPQTDQNIKINFPKDPANYILHAVLVHSGHGHYVVYLNPKDGKWCKFDDDVVSRCTKEEAIERHCTNAYMLVYI | |||||||||||||
|
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |