>PF15491 (288 residues) PIPHRVLLAGALSLPASGSPVACRSHCLSLSDPAASASVCCYLLDFDPAAVGREIHVLAW NYLPSLHHGGAGVLEVVRWRLAEEGTPAPGSGFLKTIPLDCVDDEPDSGTHGHVFGVVRS VSVVFSVPRAGQKSNAGGGDNSVGFIAEMMCCACRRCRVLPPESDQDHKFELEKFVYFVD SASRWRPVLARMVGRPVSVSGLKKRLVSIDKKGSYTMLVSTRKTMLRWCPSYPAVLKLDG SPGDCGGVYTGLVTGIYMQCMLVELDETVWLLIDDQHLAPSHSLRVGA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | PIPHRVLLAGALSLPASGSPVACRSHCLSLSDPAASASVCCYLLDFDPAAVGREIHVLAWNYLPSLHHGGAGVLEVVRWRLAEEGTPAPGSGFLKTIPLDCVDDEPDSGTHGHVFGVVRSVSVVFSVPRAGQKSNAGGGDNSVGFIAEMMCCACRRCRVLPPESDQDHKFELEKFVYFVDSASRWRPVLARMVGRPVSVSGLKKRLVSIDKKGSYTMLVSTRKTMLRWCPSYPAVLKLDGSPGDCGGVYTGLVTGIYMQCMLVELDETVWLLIDDQHLAPSHSLRVGA | |||||||||||||||||||
1 | 2hu8A | 0.08 | 0.06 | 2.38 | 1.15 | CNFpred | VDTGEAVVFTGATE---------DRVALYALDG-GGLRELARLFGFVSDIRGDLIAGLGFFG--------GGRVSLFTSNLSGGLRVFDSGEGSFSSASISP------GMKVTAGLETAREARLVTVDPRDGSVEDLELP-RPTAITWLGYLP-----------------DGRLAVVARREGRSAVFIDGERVEPQGNHGRVVLLVTSHTSSTPPRIVSLPSGEPLLEGGLPEDLRR-------SIAGSRLVWVESRVPTYVLES-PGPTVVLVHG------------ | |||||||||||||
2 | 2w5nA | 0.07 | 0.06 | 2.65 | 1.00 | Neff-PPAS | -LSDGTLLGTWENYSPE--PPNVWFPIVKSKDGGKTWKEISKVKDTQNNW--GLRYQPQLYELPRAGKYPKGTVLCSGSSIPSDLSETLIEEFVSHVALGGEALPNPGLTPVWEPFLMTYKEKLILYYSDQRDNATHSDYYARPGMPTVAKLPNNEYIYGGPNPPAGSDYWFPVYYRLSKDPQKFLNKAHHQIVGTTPAGSPYVVWTPYGGKNGTIVVSCGTRSEIFTNQALGDASAWKKWDVPQPTAYTRSLLTF-------QKDPDLLMIMGAGILPPAGGKNTVS | |||||||||||||
3 | 4v0mB | 0.11 | 0.09 | 3.12 | 0.75 | SPARKS-K | -----VRSVWLDAFNDPVAGISAYTPCVHTCNLFGD---------------GENRLVIAD---------EDRKLKIWKGTQ--KASEHPLLDTPVAICSYISENTA--PRLPALAVAAGSHIYIFVLPPEEEQQGQPLVATTV-----ITCMDVVKQAIDEPD-------AVSCLVVGTES------------GRILILNITPAMIAVQGLDVGYRITVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRL------AKHVAVGCMNDVVHAYTLYLPCHILAMQRME | |||||||||||||
4 | 1o0vB | 0.10 | 0.08 | 3.10 | 0.51 | FFAS-3D | -FTPPTV---KILQSSCDGGGH----------FPPTIQLLCLVSGYTPGTIQ-----ITWLELSQKHWLSDRTYTCQSTKKCADSNPRGVSAYLSRPSPFDLFIRKSP----TITCLVVDLAPSLTWSRASGKPVNHSRNGTLTVTSTLPVGTRDQCRVTHPHLPRALMRSTPEVYAFATPEWP-------GSRDKRTLA----CLIQNFMPEDISVQWLHNEVQL---PDARHSTTQPRKTKGSGFFVFSRLE-VTRA---EWEQKDEFICAVHEAASPSQTVQPG- | |||||||||||||
5 | 2i0qA | 0.11 | 0.06 | 2.15 | 0.37 | HHpred | ------------------------------------------------------------------------------------------------VELA--KASLTSAQPQHFYAVVIDATFPYKT---NQE----------RYICSLKIVDPTLYLKQ--QKGAGDASDYATLVLYAKR-FEDLPIIR--AGDIIRVHRATLR-----LYNGQRQFNANYSSSWALFSTSSKWASSNKAQAKD-FDVVAKILQVHELD-----EYTNELKLKDASGQKFPHVRTGE | |||||||||||||
6 | 5c2vB | 0.12 | 0.12 | 4.26 | 0.70 | MUSTER | P-DGSTLFISNQSGHARTQKVRVQPEASAVTPDGAFLYVCNSVSVVDIQ-VGDWPSGIKISYVACSGCMWN-AIDVIDTGRMEKVRSIYTSDY-GPRMVEISPDGKTLVAILDTVGSINRS--VDFIDIASGRVVEHESSNLRDVVYYIAVTHQTPKNWLPVCEAENGQVFTNNVTIIETKGKVARLPLDDLNNYDGNPYGMAKYLYIGVRGMHRVTILDMDKVLGLVRSSTQEELDYLRDDLGLVRDYLVARVPTGLGPSSVCLDGK-FCYAANYFSNNVTVIRTAV | |||||||||||||
7 | 4lg8A | 0.10 | 0.07 | 2.60 | 1.12 | CNFpred | ---QDLVFSASPD------------ATIRIWSV---NASCVQVVRAHE----SAVTGLSLHYLLSSS--DDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP----DGLIFGTGTMDSQIKIWDLK---ERTNVANFPGHSGPITSIAFSE-----------------NGYYLATAADD---SSVKLWDL-KNFKTLQLFEVKSLIFDQ-SGTYLALGGTDVQIYICK------------WTEILHFTGLTTGVAFGFIASTGMDRSLKFYSL------------- | |||||||||||||
8 | 1go3E2 | 0.18 | 0.06 | 1.81 | 0.47 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------EMYELIEGEVVDVVEF-------------------GSFVRLGPLDG-LIHVS---QIMDD------YVSYDP--KATGKVLE--IGDYVRA-----RIVAISL-KASKIALTMRQPYLGKLEWIAKKQ---------------------------------------------------- | |||||||||||||
9 | 4hdjA | 0.10 | 0.09 | 3.38 | 0.97 | Neff-PPAS | KEEVVLSKQWSRSVGDGQGDLYNLGSTIYAAS-AEGRVMAIQRETGDVLWKRPVSGGVGVGLVGTLR----GDVIALDEATGKKKWTKRVNSEVLSAPATNGDESTVPVLTLRGTGAPLIAGNMALAGLAS------------GKVVAVDVQRGLPIWEQRVAIPQGRSELDRVVDIDGGLLLSGDTLYVVSYGRAAALDVNSGRLLWQREASSYVGVAEGFGNIYVSQASSLWNNDAARRQLSAPAVFSSNVVVGDLEGYVHLLSRFVGRERVDSDGVRVRPLVVGS | |||||||||||||
10 | 5w2lA | 0.12 | 0.05 | 1.71 | 0.78 | HHsearch | --------------------------------------------------------------------------------------------------------------------PHLGQSRLFLL---CHKEAPEVPKPALSFYVLGSWGGTQRKEGGLPEPQ-----DQKVHLIFFGSSVRWFEFLH--PGQVYRLIAPGPAMLFEKD--RRPLELAGCASCLTVQDNWSQDIQDVLDA---------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |