>PF15480 (291 residues) CSSESDLSLSVGYFPCEDTFSHENTTSCEDMSPEGPSIHFIPPIQGTWWTESRGRLLGRR DQIQDNPGQFCKLSITLAWDVDVDSNNSDSVANWDLNGDNQWTDKYPKEKKQPTLSKLDS LVQKLEKFLENQKDDEDDDSVFPESAQEEDFQLSSSSSPDIAQDIHQEHTCQDLPKFDPP ENEDVIQFPEIPPRLHEHEPVEILSQTTGSQRASTVETSSTSSGQPEEEDTHSGTQAPSC LNFRWVFRWLRQQVLSSLLGRRRPEKATKSPHQLVQKKRPSHRGKRIQPQE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | CSSESDLSLSVGYFPCEDTFSHENTTSCEDMSPEGPSIHFIPPIQGTWWTESRGRLLGRRDQIQDNPGQFCKLSITLAWDVDVDSNNSDSVANWDLNGDNQWTDKYPKEKKQPTLSKLDSLVQKLEKFLENQKDDEDDDSVFPESAQEEDFQLSSSSSPDIAQDIHQEHTCQDLPKFDPPENEDVIQFPEIPPRLHEHEPVEILSQTTGSQRASTVETSSTSSGQPEEEDTHSGTQAPSCLNFRWVFRWLRQQVLSSLLGRRRPEKATKSPHQLVQKKRPSHRGKRIQPQE | |||||||||||||||||||
1 | 2tmaA | 0.07 | 0.07 | 2.68 | 1.92 | Neff-PPAS | -----------------DAIKKKMQMLKLDKENALDRAE----QAEADKKAAEDRSKQLEDELVSLQKKLKGTEDEL---DKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKA | |||||||||||||
2 | 2nbiA1 | 0.09 | 0.09 | 3.27 | 1.11 | PROSPECTOR2 | PSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCP--------------ACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQSSRPLDCTDPAVNRPDCDVLPTPQTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDSPSAVTVPLTPAPSSAPTR | |||||||||||||
3 | 5h7iC | 0.10 | 0.10 | 3.52 | 0.91 | SPARKS-K | ----------VPVIDLNRVSDEEQLLPVVRAILLQHDTFLL---KNYANKAVLDALLAGLTT-KDLPDTSQGFDFT----GTLPLEDDVWLEQYIFDTDPQ--LRFDRKCRNESLCSIYSRLFKLGLFFAQLCKSVVSSAELQDCISTSHYATKLTRYFGVLTIFPCAKAIRYKPSTMATTDNSWVSIDE--PDCLLFHTGTLLARWSQGMHTTSPLQIDPRANIVSLTIWPSILRLQDAMKFVKELFTVCETVLSLNALS-RSTGVPPELHVLLPQISSMMKRKIVQDDI | |||||||||||||
4 | 4bmlA | 0.05 | 0.04 | 2.02 | 0.50 | FFAS-3D | -RGGKSKQFMTGKLSAGYHTPGTPIVGDAGIKANEKT---LVMDDLLVSSQFVYSLDEIFSQYSTRAEVSKQIGEALATHYDARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAIVDGFFEAAAVLDERSAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAGCIQSVAPTI----------------------QTTSGDFNVQYQGDLIVGKLAMGCGSLRTS- | |||||||||||||
5 | 4jgwA3 | 0.13 | 0.03 | 0.95 | 0.27 | HHpred | -------------------------------------------------------VADRLEALESYPPG-----------------ELERTTGVAISVLSTWLASHPEDFGSEVK----GQLDRLESFLLRTGYSA----------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2atyA | 0.12 | 0.11 | 4.03 | 0.89 | MUSTER | CGSYYSTPIAVGRYSCSGTFRLIGEKSLLCITKDKVDGTKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNQANNMWGPTRLPTFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSVFIFPPKPLTPKVTISKDDPEVQFSDVEVHTAQTQPREEQFNSTFRSVSEIMHQDWLNGAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCM--DITVEW--------QWNGQPAENYKNTQPIMNTNESYFVYSKNVQKSN | |||||||||||||
7 | 1qisA | 0.14 | 0.04 | 1.28 | 0.35 | CNFpred | ---------------------------------------------------------------------------RVGACTLVA-----------------------------DSETVDRAFSQMKAAIRAN---------------------YSNPPAHGASVVAT--------------------------ILSNDALRAIWEQE--------------------------------LTDMRQRIQRMRQLFVNTLQ-------------------------------- | |||||||||||||
8 | 2pffB | 0.21 | 0.21 | 6.55 | 0.80 | HHsearch-2 | AYSTRPLTLSHGSLVPTASFFIFNKILPEPTEPYVSS-LVEPSKVGQFDGNDIHALAAKLLQENDTTLVKIKNYITARIMAKRPFDKKSNSALFRAVGEGNAIFG-GQGNTDDYFEELRDLYQDLETLSELIRTTLDAEKVFTQNTPDKDYLLSICPLIGVIQLAHYV-VTAKLLGFTPGELRSYLKGATSQGLVTAVAIAETDS--WESVRARCYEAYPNTSLPPNNEGVPSPMLSISNLTQEQVQDYVNKQVEISLVNGAK-NLVVSGPPQSTLRKKFSNHSHLLVPAS | |||||||||||||
9 | 2bsgA | 0.06 | 0.05 | 2.45 | 1.70 | Neff-PPAS | --KTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIEVGNLREELVYSRLNEIDTKQTTVESDISAI---KTSISIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNSVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFL---- | |||||||||||||
10 | 1ka4A4 | 0.17 | 0.04 | 1.36 | 0.45 | HHsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IGTLLS-AQLYYHIKK-----------------------DIPDFEEKVAKAEFDPIKAWLREKIHR-WGSIYPPKKAIGEDMDAEYFVRWVK-EK-YL--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |