>PF15310 (248 residues) EEDQVSTNHRSICVQTSKHLFWADKLIQASEHSLERMTDTQLGKNKGKTISHLGQQSVPK DTTCSKKQLQTPSAQPAPPATDSQQLPNPYPSSSSLSPAIGLEELVNFASSLAVASSSKM DLPNLEHMIKAPPQKAEAPSTDPTTQVAVDQPEKKKLTKELPDRPPLKARESQKAQKPQD KNFSHPYLDFSKPGIKRATIKGEVKLLQPPAMSPLPQGDMKDSVPGTRKGSPLLLKIHFK VSSPTSPE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | EEDQVSTNHRSICVQTSKHLFWADKLIQASEHSLERMTDTQLGKNKGKTISHLGQQSVPKDTTCSKKQLQTPSAQPAPPATDSQQLPNPYPSSSSLSPAIGLEELVNFASSLAVASSSKMDLPNLEHMIKAPPQKAEAPSTDPTTQVAVDQPEKKKLTKELPDRPPLKARESQKAQKPQDKNFSHPYLDFSKPGIKRATIKGEVKLLQPPAMSPLPQGDMKDSVPGTRKGSPLLLKIHFKVSSPTSPE | |||||||||||||||||||
1 | 6fmlG | 0.09 | 0.09 | 3.50 | 1.18 | MUSTER | TNVALGYSTRSLVEYRLPRLIWCDGGKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFV | |||||||||||||
2 | 2tmaA | 0.09 | 0.09 | 3.36 | 1.38 | Neff-PPAS | --DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQ-----ERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQE-IQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEF | |||||||||||||
3 | 4k0mC | 0.07 | 0.05 | 2.18 | 1.13 | PROSPECTOR2 | KVYTI----------------------------------DEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAG--------------ADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||||||
4 | 3j2k71 | 0.08 | 0.07 | 2.68 | 0.88 | SPARKS-K | PKSVVAPPGAPKKEHV-NVVFIG--HVDAGKSTIGGQIMYLTGMV-DKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKKTVEVGRAYFETEKKHFTI------------LDAPGHKSFVPNMIGGASRKGEFETGFEKGGQTREHAMLAKTAGVKMDDPTVNWSNVPFLKKVGFNPKKDIHFMPCNLKEQSDFCPWYIG-LPFIPYLDNLPNFNRSVDG-------------------------- | |||||||||||||
5 | 4bmlA | 0.08 | 0.07 | 2.68 | 0.54 | FFAS-3D | ---------------------FSGEVFTANNASIFKGLVRSYDLRGGKSKQ------FMFTGKLSAGYHTPGTPIVGDAGIKANEKTLVMDDLLVSSQFVYSLDEIEVSKQIGEALATHYDERIARVLAKASAEASPEPGGFHVNIGAGNTNDAQAIVDGFFE--------AAAVLDERSAPQEGRVAVLS-PRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRI-------LKSNNLAG | |||||||||||||
6 | 1gm5A1 | 0.15 | 0.10 | 3.25 | 0.34 | HHpred | --------------------------LEEFLNEVEKMLKNQVNT---------------RR--I-H-Q--------LL----KELD-------DPLLENKDLEEKLQAFLDYV-KEIPNLPEARKRYRIQKSLRSWFLIDYLECSGEELSTD-IQYAGKKKL-KK-L------GIETLRDEFFPRDYEDRRKPG-EKVTTQGKIVSVETKKFQNILTAVLSD---GL--VH-VPL-KWFNQ------- | |||||||||||||
7 | 6etxG | 0.13 | 0.13 | 4.44 | 1.05 | MUSTER | KPYHISKRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAAD---WLNRRSQFFPEPAGGLWSIRPQNGWSFI-------RIPGKESLI | |||||||||||||
8 | 3mixA | 0.09 | 0.03 | 1.06 | 0.48 | CNFpred | -------------------SVVSTHITEKIKQHAHELIGRQ----------------------ETKQLIDHL------------KESYPVLVEEVTPNPLSVGDIQKVLAKLLKE---KVSIRNLVTIFE---------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 3ujzA1 | 0.16 | 0.04 | 1.33 | 0.55 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSAIYFNTSQPINGSLAAEVKFAQSQILPAH--PKEGDSQPHLTSLRKSLLLVRPVKADDK-TP | |||||||||||||
10 | 1dgiR | 0.09 | 0.08 | 3.12 | 1.34 | Neff-PPAS | -----------VVVQAPTQVPGFLG----DSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNRSNPEPTGYNSTTMGPLPPF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |