>PF15302 (299 residues) MGGMKLPVGMTRRALSYDDNLEAPMSTPPHDISINNLWRRPIIPERKFSQLAEEDEGGPV RRAAAQDSALFKAPAVVKTKASSIIMNSLITKQTQESMYKFEQTAGLTDTSYTPHKGLTA EETRHHHRVPESLQKLQIQSLEAREEKSSSAQSTPSNTPHSSPKQQRRGWFGSASSEISS SNSSVDMGGGGGGGGGGDPVAGGAVERWGVFGPRLPVQSSTADPGPDGSAAGFAIQAYRG AQKPTPMEVMKSQATRLADNPQRVSPPKMEIPTVEGRRQGARPHKLKHRDMNILTPSGF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MGGMKLPVGMTRRALSYDDNLEAPMSTPPHDISINNLWRRPIIPERKFSQLAEEDEGGPVRRAAAQDSALFKAPAVVKTKASSIIMNSLITKQTQESMYKFEQTAGLTDTSYTPHKGLTAEETRHHHRVPESLQKLQIQSLEAREEKSSSAQSTPSNTPHSSPKQQRRGWFGSASSEISSSNSSVDMGGGGGGGGGGDPVAGGAVERWGVFGPRLPVQSSTADPGPDGSAAGFAIQAYRGAQKPTPMEVMKSQATRLADNPQRVSPPKMEIPTVEGRRQGARPHKLKHRDMNILTPSGF | |||||||||||||||||||
1 | 6e5oY | 0.12 | 0.11 | 3.79 | 1.03 | SPARKS-K | EPALFVALTFERREVVDPSNVARGENIPAVIALTDPEGCPLRIGERAIQAAKEVEQRRAGGYSRKFASK------------SRNLADDMVRNSARDLFYHAVTHANLSRGFGRQGKRTFMTERQYTKMEDWLTAKLAY---EGLTSKTYLSKTLAQYTSKTCSN------CGFTITYADMDVMLVRLKKTSDGWATTLNNKELKAEYQITYYNRYKRQTVSKWFSHRPVQEQF--VCLDCGHEVHAAEQAALNIARSWLNSNST-----EFKSYKSGKQPFVGAWQAFYKRRLKEVWK- | |||||||||||||
2 | 6fmlG | 0.08 | 0.08 | 3.16 | 1.10 | MUSTER | SATLMNLVMQFRKVCNHPDLFERADTSSPFFCGHFAETGSFLREGTGYSTRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLE--GIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTDSG- | |||||||||||||
3 | 3cnfT | 0.07 | 0.06 | 2.66 | 1.71 | Neff-PPAS | YPSKAIPADELIDNLHWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAILNYSNPQDAFNSVFVALGIDYI-------DIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILA----------LMRKSTLVSTHSSWHWDVLHTFHYRSESDMIDHFAAKILEDWRQKEKLDKGALVEADRVVQRLIPLSSSTYVQRLAATALLQLSDTYYQHANDQLRRLYRRMYNDSRTMTQRHQELLLAQITADPNILLYPYTYIFTTAYTSMNYISNTGQGRIKHSLAVTGT | |||||||||||||
4 | 2nbiA1 | 0.10 | 0.10 | 3.55 | 1.29 | PROSPECTOR2 | QPSDLNPCADVLEECPIDECFDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVI-----------------EECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSMFTPSPDGSPPICSPTMMPSPEPSSQPSKSDSARPPDCTAVGRPDCNVLPFPNNISPPNCSPTMLPSPSPSAVTVPLTPAPS---SAPTR | |||||||||||||
5 | 3kz4B2 | 0.10 | 0.09 | 3.26 | 1.01 | SPARKS-K | -KKQTKLFRIPRQLPIYRANGEKELRN-------RWYWKKDTLPDEYFLNLYDQVLTEMPDYLLAVENKNSRDAGKVVDSETASICDAIFDEETEGAVRRFIAEMRQRVQA-------DRNVVNYLHPIDYAFNEYFLQHQVRRLDIFNLILMNMDQIERASDKI--AQGVIIAYRDMQLERDEMYGYVNIARNLDGFQ-------QINLEELMRTGDYAQTNMLLNNQP--VALVALPFVTDSSVISLIAKLDATVFAKVDTLKPILYKINSDSNDFYLVANYDWVPTSTTKVVPQQF | |||||||||||||
6 | 4bmlA | 0.07 | 0.06 | 2.47 | 0.59 | FFAS-3D | -----------RYATAFSGEVFTAFNNASYDLRGGKSKQFMFTGKLSAGYHTPIKANEKTLVMDDLLVSSQFVYSLDEIFSQYSTRAEVSKQIGEALATHYDERGEPGGFHVNIGAGNTNDAQAIVDGFFEAAAVLDERSSSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAGCIQSVAPTIQTTSG---------------------------DFNVQYQGDLIVGKLAMGCGS------LRTSVAGSFQAA-- | |||||||||||||
7 | 2pffB | 0.19 | 0.13 | 4.31 | 0.44 | HHpred | --------KVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIQLAHYVVTAKLL--GF-TPGEYLKGATGHSQGLVTAVAIESFFVSVRKAITVLFFIGV------RCYEAYPNTSL-----------PPSILEDSL---ENNEGVPSPMLSI-SNLTQEQ----VQDY----------------------------------VNKTNSHLPGKQVEISLVNGAKNLVVSG-PPQSLYGLN----LTL--------RKAKAPSGLDQSRIPFSE------RKLKFSNRFLPVASPFH- | |||||||||||||
8 | 6etxG | 0.10 | 0.09 | 3.51 | 1.07 | MUSTER | FRKVCNPELFERQETWSPFHISLKPYHISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRL-----HQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDLTRLKSQGY | |||||||||||||
9 | 3nddA | 0.14 | 0.03 | 1.14 | 0.41 | CNFpred | --------------------------------------------FSLYRQLAHQSN---------------STNIFFSPVSIATAFAMLSLGTKADTHDEILEGLNFNLTEI--------PEAQIHEGFQELLRTLN------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 2pffB | 0.19 | 0.17 | 5.52 | 0.88 | HHsearch-2 | MDAYSTPLTLSSFFIAS-QLQEFNKILPEPTEGF-AADDEPTTPAEKFGYLVEFENCYLEGNDIHALAAQENDTTLVKTKEL---IKNYITARIKKNSALFAVGEGNAQLVAIFNTDDYFEEQTYHVLVGDTLSELIRTT--LDAEKFTEWLENPSNTPHSQGLVETDSWESFFVSVPNTLPPSISLENNEGVPSPMLSISNTYVNKTNSHLPGKQVEISLVNGAKNL-------------VVSGPQSLYGLNL-TLRKAKAPSGLDQSRIPFSE------RKLKFSNRFLPVASPFHS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |