>PF15282 (267 residues) DDFDVFTKAPFSKKVSQQDGQVVGTEPLLSPASPRSVDIFGCTPFQPSLLPKTGGSKEDL FGLVPFEEIAGSQQQKVKQQRNLQKLSSRQRRMKQEVSKNNGKRHHGTPTTTKKALKPSY RTPERARRHKKAGRRDSQSSNEFLTISDSKENISVALTDSKDRTNPLQTDESLLDPFGAK PFHPPDLMRHPQHQGFSDNRGDHGAVVVAGRPRQSSLHGAIHGGDGLKTDDFGAVPFTEL VVQSAQSQQQQALELDPFGAAPFPSKQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | DDFDVFTKAPFSKKVSQQDGQVVGTEPLLSPASPRSVDIFGCTPFQPSLLPKTGGSKEDLFGLVPFEEIAGSQQQKVKQQRNLQKLSSRQRRMKQEVSKNNGKRHHGTPTTTKKALKPSYRTPERARRHKKAGRRDSQSSNEFLTISDSKENISVALTDSKDRTNPLQTDESLLDPFGAKPFHPPDLMRHPQHQGFSDNRGDHGAVVVAGRPRQSSLHGAIHGGDGLKTDDFGAVPFTELVVQSAQSQQQQALELDPFGAAPFPSKQ | |||||||||||||||||||
1 | 6buaA | 0.07 | 0.07 | 2.91 | 1.23 | SPARKS-K | LPRVGEICYAYEIFLEPQFESCEYTEHMYLNLTPRNYAILLRNKLPRLAEMPNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLDRRSKENVPLILGEQKCFDWELMTNFRRLPQSHGSNVQQREQQPAPRPEDFEGKIVTQWYANYDKPMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYG---NRIGDVVHKDKFMIEVRDLTEQLTFYVHNVILIPELCFNFNFPGDLWLKLIFLPSILNRMYFLL | |||||||||||||
2 | 6etxG | 0.11 | 0.11 | 3.93 | 1.10 | MUSTER | NHPELFERQETWSPFHISLKPYHISGQIRVFNHSRDRWLRVLSPFAPSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKY | |||||||||||||
3 | 2bsgA | 0.06 | 0.06 | 2.48 | 2.08 | Neff-PPAS | -QINKKDISDLKTLTSEHTEILNGTNNTVDSILKHRIINNTDVITSQGIRLSLTIEVGNLREELVYSRLNEIDTKQTTVESDISAIKTSISIITS------VNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNGIKGQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGN----ISSLQGDVQALQEAGYIPEAPRDGQAYVRKD | |||||||||||||
4 | 4bmlA | 0.08 | 0.07 | 2.99 | 1.31 | PROSPECTOR2 | VRYATARSYDLRGFTGKLSAGYHTPGTPIVGDAGIKANEKTLVMDDLLVSSQFVYSLDEIFSQYSTR-----AEVSKQIGEALATHYDERIARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAIVDGVLDERSAPQEGRVAVLSPRSSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSN--NLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAGCIQSVAPTIQTTSGDFNVQYQGDLIVLRTSVAGSF-QAA | |||||||||||||
5 | 4btgA3 | 0.14 | 0.13 | 4.63 | 1.16 | SPARKS-K | GSARGLTQAFAKNQLSVGALQLPLQFTRTFSASMTSELLVGRTATYPFD---ANAVVSSVLTISTPKELDPSARLRDQLRSNLALFIAYQDMVKQRAEVIFSDEETIIPWFIEEVSPFKLRPINETTSYDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGILAPIGVNSNGAEMTLGFPSVVERVDESLEARAVAHNPEAAEQGSLYLVWNVRTELRIPVGPEPLEAIAYNKQPSEVLQAKVLDLANHTTSIHIW | |||||||||||||
6 | 2xd8A | 0.10 | 0.09 | 3.51 | 0.63 | FFAS-3D | KSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAEKTIVM-----DDLLISSAFVYDLDETLAHYELRGEISKKIGYALAEKYDRLIFRSITRGARSASPVSATNRVGSGTNESDAFTASALVNAFYDAAAAMDEKGVSSQGRCAVLNPRQYYASNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHGTNAELGAKSCGLIFQKEAAGVVEAIGPQVQVTNGDVSVIYQGDAMGADYLNPA- | |||||||||||||
7 | 1u0kA | 0.09 | 0.07 | 2.68 | 0.28 | HHpred | WQLDVFAERPLTGNGLAVFDDASLDDAA-QAWTR-E---LRQSIFLLPGDPRTLEEELPFAGHPLL--GA----AALLHHLRGGD--N-EQHWTLHLA--SKSVVAGSGFYAEDQGRAEFGATRWFA--EAFSLSAVSTGLPYLLVTAALGRARQVN-D----LQEAL-DK--LGAAFVYLLDVDG--REGRTWDN-LGLVE--------DVATGSAAGPVAAEYG-LAA--RG---EPFVLHQG---------------------- | |||||||||||||
8 | 6fmlG | 0.11 | 0.11 | 3.92 | 1.07 | MUSTER | NHPDLFERADTSSPFFCGHFAETGSFLREGTNVALGY----STRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMA | |||||||||||||
9 | 2pffB | 0.17 | 0.16 | 5.43 | 0.91 | HHsearch-2 | EQFNELVGKFLGYVSSLVNCYLEGALAAKLLQENDTTRIMAKRPFDKKSNSALNAQLVAIFTDDYFEELRDLYQTGDLIKFSAETLSELIRTT-LDAEGLNILEWLENPNTPDKDYLLSIPTPGELRSYLKGATGHSQG---LVTATDSLENNEGVPSPMLSIS-NLTQEQVQSHLPAGKQVEISLVNGAKQLYGLNLTLRK-AKAPSGLDSRIPFSERKFSNRFLPVASPFHLVPASDLINKSFNAKDIQIPVYDTFDGSDLRVKW | |||||||||||||
10 | 3cnfT | 0.06 | 0.06 | 2.60 | 2.06 | Neff-PPAS | ----NFSETDRGHPLFRLPLKYPSKAIPADELIDNLHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAILNYSNPQDAFNSVFVALGIDYIDIPITNSNIFDPTMTEVNHILALMRKSTRSESDMIDHFAAKILEDWRQKEKLDKGALVEADRVVQRLIPLSSSTYVQRDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPYTYIFTTAYTSMNYISNTGQGRIKHSLAVTGTTE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |