>PF15165 (241 residues) WPLQRYARCIPSNTRDPPGPCLEAGTAPCPTWKVFDSNEESGYLVLTIVISGHFFIFQGQ TLLEGFSLIGSKDWLKIVRRVDCLLFGTTIKDKSRLFRVQFSGESKEQALEHCCSCVQKL AQYITVQVPDGNIQELQLIPGPPRATESQGKDSAKSVPRQPGSHQHSEQQQVCVTAGTGA PDGRTSLTQLAQTLLASEELPHVYEQSAWGAEELGPFLRLCLMDQNFPAFVEEVEKELKK L |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | WPLQRYARCIPSNTRDPPGPCLEAGTAPCPTWKVFDSNEESGYLVLTIVISGHFFIFQGQTLLEGFSLIGSKDWLKIVRRVDCLLFGTTIKDKSRLFRVQFSGESKEQALEHCCSCVQKLAQYITVQVPDGNIQELQLIPGPPRATESQGKDSAKSVPRQPGSHQHSEQQQVCVTAGTGAPDGRTSLTQLAQTLLASEELPHVYEQSAWGAEELGPFLRLCLMDQNFPAFVEEVEKELKKL | |||||||||||||||||||
1 | 2vtuJ | 0.08 | 0.08 | 3.09 | 0.87 | PROSPECTOR2 | ASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSS------AQNRKYTIKVEVPK---VATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQPIPSAIAANSGIYANFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAKVEVPKVATQTVGGVELPVAAWRSFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGI | |||||||||||||
2 | 6nxfA | 0.77 | 0.37 | 10.33 | 2.07 | SPARKS-K | WSLKRYGRFLLDNVGGSST------------WKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVRR-DCLLFGTTIKNKSR-FRVQFSGESKEEALERCCGCVQTLAQYVTVQE----------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 6nxfA | 0.77 | 0.37 | 10.33 | 2.21 | FFAS-3D | WSLKRYGRFLLDNVGG------------SSTWKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVR-RDCLLFGTTIKNKSR-FRVQFSGESKEEALERCCGCVQTLAQYVTVQE----------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 6nxfA | 0.78 | 0.37 | 10.44 | 6.03 | HHpred | WSLKRYGRFLLDNV------------GGSSTWKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVRR-DCLLFGTTIKNKSR-FRVQFSGESKEEALERCCGCVQTLAQYVTVQE----------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 6nxfA | 0.77 | 0.37 | 10.33 | 1.70 | MUSTER | WSLKRYGRFLLDNV------------GGSSTWKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVRR-DCLLFGTTIKNKS-RFRVQFSGESKEEALERCCGCVQTLAQYVTVQE----------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2y8fA | 0.11 | 0.04 | 1.48 | 0.65 | CNFpred | -----------------------------QSWVERG----RGLLRLNDMAQSRLVMRTQLRLILNTKLWA--QMQIDKASEKSIRITAMDTQGVKVFLISASSKDTGQLYAALHHRILALRS----------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6nxfA | 0.78 | 0.37 | 10.44 | 4.94 | HHsearch-2 | WSLKRYGRFLLDNV------------GGSSTWKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVRR-DCLLFGTTIKNKSR-FRVQFSGESKEEALERCCGCVQTLAQYVTVQE----------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6nxfA | 0.78 | 0.37 | 10.44 | 2.30 | Neff-PPAS | WSLKRYGRFLLDNVGGSS------------TWKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVRR-DCLLFGTTIKNKSR-FRVQFSGESKEEALERCCGCVQTLAQYVTVQE----------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 6nxfA | 0.78 | 0.37 | 10.44 | 7.48 | HHsearch | WSLKRYGRFLLDNV------------GGSSTWKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVRR-DCLLFGTTIKNKSR-FRVQFSGESKEEALERCCGCVQTLAQYVTVQE----------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6nxfA | 0.77 | 0.37 | 10.33 | 1.61 | SP3 | WSLKRYGRFLLDNV------------GGSSTWKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVRR-DCLLFGTTIKNKS-RFRVQFSGESKEEALERCCGCVQTLAQYVTVQE----------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |