>PF15156 (276 residues) DGDAPVKKSHFHLDLWFYFTVQNWVLDFGRPVAMIILPLEWFPLNKPSVGDYFHMAYNVI TPFLLLKLIERSPKTLPRAAVYICIITFVMGASIHLVGDSVNHRLILSGYQLHLSVRENP IIKNLKPEALIDSFELLYYYDENLGHSMWYIPFYLIFFLYFTGCFTPIKEDNKMPLSAWL LLGPSGLYYWYLVTEGQIFILYIFTFFAMMAIVMHQKRKGLVLDSNGLFLFYSFSITLAL IAVWVVWLWNDKILRKKYPGVMYVPEPWAFYSLHIK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | DGDAPVKKSHFHLDLWFYFTVQNWVLDFGRPVAMIILPLEWFPLNKPSVGDYFHMAYNVITPFLLLKLIERSPKTLPRAAVYICIITFVMGASIHLVGDSVNHRLILSGYQLHLSVRENPIIKNLKPEALIDSFELLYYYDENLGHSMWYIPFYLIFFLYFTGCFTPIKEDNKMPLSAWLLLGPSGLYYWYLVTEGQIFILYIFTFFAMMAIVMHQKRKGLVLDSNGLFLFYSFSITLALIAVWVVWLWNDKILRKKYPGVMYVPEPWAFYSLHIK | |||||||||||||||||||
1 | 3wajA1 | 0.08 | 0.08 | 2.97 | 1.01 | SPARKS-K | NSVFTWTVRLGGNDPWYYYRLIENTIHNFPHRI-WFDPFTYYPYGSYT-------HFGPFLVYLGSIAGIIFATSGESLRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIA----------IVPGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKGHDLTARQMAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFA------FNYPGFSTIFYSPFQLLVLLGSAVI | |||||||||||||
2 | 3rkoB | 0.10 | 0.09 | 3.24 | 1.27 | CNFpred | ------------LMWATLMLLGGAVGKSAQLPLQTWLADAMA---PTPVSALIHAATMVTAGVYLIARTHGLFPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYST-----MSQIGYMFLALG----VQAWDAAIFH--LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANG---HINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILST | |||||||||||||
3 | 3wajA | 0.10 | 0.09 | 3.34 | 1.01 | SPARKS-K | WNSVFTWTVRLGNDPWYYYRLIENTIHNFPHRI-WFDPFTYYPYGSYT-------HFGPFLVYLGSIAGIIATSG-ESLRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIA----------IVPGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKG-HDLTARQMAYPVIAGITIGLYVLSGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFA----------FNYPGFSTIFYSPFQLLVLLG | |||||||||||||
4 | 5tgzA1 | 0.11 | 0.09 | 3.28 | 0.82 | FFAS-3D | RGENFMDIECFQLAIAVLSLTLGTFTVLENLLVLCVIPSYHF-IGSLAVADLLGSVI--FVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVSLFLAAIDRYIS--------------IHRPLAYKRIVTRPKAVVAF-----CLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDKTYLMFWIGVVS------VLLLFIVYAYMYILWKAHSHAPDQARMDIELAKTLVLILVVLIICWGIYALRSKDLRHAF------------------ | |||||||||||||
5 | 3wajA | 0.11 | 0.09 | 3.24 | 0.34 | HHpred | ---VFTWTVRLGNDPWYYYRLIENTIHNF-PHRIWFDPFTYYPYGSYHFGPFL----VYLGSIAG--IIFSATSGESRALALAILPVYLLTREVF---DKRAAVIAA-------------FLIAIVPGQFL-QRSILGFND----HHIWEAFWQVSALGTFLLAYNRWKGHDLT-ARQMAYPVIAGITIGVLSWGAGFIIAPIILAFMF-FAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFS------------------------ | |||||||||||||
6 | 3wajA1 | 0.12 | 0.11 | 3.85 | 0.92 | MUSTER | NSVFTWTVRLGGNDPWYYYRLIENTIHNF-PHRIWFDPFTYYPYGSYT--HFGPFLVYLGSIAGIIF--ATSGESLRAVLAFIPAIGGVLAIPVYLLTREVDKRAAVIA----IAI--VP------------GQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKGHDLTARQMAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIE | |||||||||||||
7 | 5gmyA | 0.14 | 0.11 | 3.70 | 1.20 | CNFpred | -----------GNDPWYYYRLIENTIHN-FPHRIWFDPFTYYPYGSYT---HFGPFLVYLGSIAGIIFSATSGESLRAVLAFIPAIGGVLALPVYLLTREVFDKRAAVIAAFLIAI--------------VPGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKGHDL-RQMAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFV-----NADRKNLSLVAVVTFAVSALIYL------------------------------ | |||||||||||||
8 | 2pffB | 0.15 | 0.13 | 4.39 | 0.84 | HHsearch-2 | DAYSTRPLTLSHGSLEHVLLVPTASFFIASQL-----QEQ-FNKILPEPTEGFAADDEPTTPAELVGKLGVSSLVEPSKVVHALAALLQNDTTLVKTKELIKNYIMAKPFDNSALFRAVGEGNAIFDEELRDLYQTYH---VLVGDLIKFSAETLSELIILEWLENPS----NTPDKDYLLIGVIAHYVVTAYLKGHSQGLV--T-----AVAIAE-T-----DSWESFF-VSVRKATVLFFIGVRCYEAYPN----------TSLPPSILEDSLE | |||||||||||||
9 | 5ezmA1 | 0.08 | 0.07 | 2.62 | 0.76 | Neff-PPAS | -----DMRHLVGPDEGRYAEISREMFASGDWVTIRYNALKYFEKLGEWQARLAVALSGLLGIGVSMMAARRWARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDHEHWQRRSGSGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSKL------PGYIVPVIPALGILAGVALDRL---------------------------- | |||||||||||||
10 | 6ftg3 | 0.16 | 0.06 | 2.06 | 0.55 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------AMTVYALVVVSYFLYDVIVEPPSVGSDHGHQRVA----FLAYVNGQYIMEGLASSFL-FTMGGLGFIILDRSNAPN-IPKLNRFLLLFIGFVCVLLSFFMA----RVFMRMKLPGYLMG------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |