>PF15135 (298 residues) RENFHGKIPVDKATVLMRRYRNNHRMVAMEIILMKDRDLDEEDKWSLENDTVVRNVVQKL QTEEREQSERDARSSGASDDSKRSKQPKTSKQGTNKDRDIEELGKRLRVLPLTEKNMRMF DHAQKNLMPSVIHQFACETCDQVWWRRVPQRKRVSRCRRCKKKYDPVPPHKMWGIAEFFC LNCSRSFKGFGRMDIGSPCYICRSIILPTQILPPRRNMRDQGPRRRQQHSCLAEDCYNRQ EPHVTGTECVHPRSRQKNNKPQVVNPSLPHISSGSTVNTCLSQGSLLEQVYELILDDI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | RENFHGKIPVDKATVLMRRYRNNHRMVAMEIILMKDRDLDEEDKWSLENDTVVRNVVQKLQTEEREQSERDARSSGASDDSKRSKQPKTSKQGTNKDRDIEELGKRLRVLPLTEKNMRMFDHAQKNLMPSVIHQFACETCDQVWWRRVPQRKRVSRCRRCKKKYDPVPPHKMWGIAEFFCLNCSRSFKGFGRMDIGSPCYICRSIILPTQILPPRRNMRDQGPRRRQQHSCLAEDCYNRQEPHVTGTECVHPRSRQKNNKPQVVNPSLPHISSGSTVNTCLSQGSLLEQVYELILDDI | |||||||||||||||||||
1 | 4btgA | 0.11 | 0.10 | 3.78 | 0.80 | SPARKS-K | KADAVGKVPPTAILEQLRTLAPHHITTDFVCHVLSPLGFILPRVGRTATYPNFYALVDCVRASDLRRMLTALSSVDSKMLQ----ATFKAKGALAPALISQHLANAATTAFVVSSVLTILGRLWSPSTPKELD--PSARLRNTYQDMVKQRGRA-EVIFSDEELTIIPWFAMSEVSPFKLRPINETTSYIGQMGQPSHVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAP-IGNTFAVRTAVYEAVSQRGTVNGAEMTLGFPSVVERDYALDRDPMVAIAALRTGI | |||||||||||||
2 | 6gylW | 0.14 | 0.07 | 2.40 | 0.65 | FFAS-3D | ---------KNLLKFVVRGFYGGSFVLVLDAILFHSVLAEDDLKQLLSNKTELGPLIARLRSDR------LISIHKQREYPPNSKSVERVYYYVKYPHAIDAIKWKVH-----QVVQRLKDDLDKN---SEPNGYMCPICLTKYTQLLNFDRTEFLCSLCDEPLVEDDSGKK------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
3 | 6o9lQ | 0.15 | 0.13 | 4.28 | 0.54 | HHpred | --------ALKRAKYVIRGYGIEHALALDILIR--NSCVKEEDLELLKFDRKLRSVLNNLKGDKFIKC-RMRVETA------ADG---KTTRHINY-RTLVN------VVKYKLDHM-------RRRIETDERDSTN--------------RASFKCPVCSSTFTDLEANQLFDPGTFRCTFCHTEVEEDESANQIEPIYATEDVNLAYEILEPEPTEIPALKQSREAWATKGPSYEDLYTQNVMDDQEDSLEGKSAKERPIWLRESTVQGAYGSEDMKEGGIDDDNEEVMRALLI-- | |||||||||||||
4 | 5hamA | 0.12 | 0.10 | 3.46 | 0.80 | MUSTER | ----DYWYTENEITHLLTAQLDEKKFSVQPAITFRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVI-EMGYGHWTVLVAKYD---------------KKDNQIILTFNDSL-GNSINYDGQKLPKLIDKTLGNLPNKPII------IDEQTKQQTDQSAC--------------GVFTVDNGIKIAKGQAIL----STEESKGEKG------LRLREHHAQILTDAM | |||||||||||||
5 | 3o3xA | 0.11 | 0.04 | 1.33 | 0.59 | CNFpred | ---------IEAQQHLLQLTVWGIKQLQARILSGG---GWMEWDREINNTSLIHSLIEESQNQQEKNEQELLGGSGGS------GIVQQQNN------LLRAIEAQQHLLQLTVWGIKQLQAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3ir9A2 | 0.20 | 0.03 | 0.86 | 0.42 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AERVTTKCSVCGYENKWTRRWPAAGNCPKCGSSLEVTDVTD------------------------------------------------------------------------------------- | |||||||||||||
7 | 5hamA | 0.10 | 0.08 | 2.89 | 1.21 | Neff-PPAS | -------YTENEITHLLTAQLDEKKFSVQPAITFRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVIPIEMG---------------------------YGHWTVLVAKYDKKDNQIILTFNDSLGNSINYDGQKLTLGNLPNKPIIIDEQTKQQTDQSACGVFTVDNGIK-IAKGQAILSTEESKG-----------------------EKGLRLREHHAQILTDAM | |||||||||||||
8 | 3ir9A2 | 0.20 | 0.03 | 0.86 | 0.50 | HHsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AERVTTKCSVCGYENKWTRRWPAAGNCPKCGSSLEVTDVTD------------------------------------------------------------------------------------- | |||||||||||||
9 | 6etxG | 0.12 | 0.11 | 3.81 | 0.76 | SP3 | RHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVV----HQRRSATSSLRRCLLTELP--------------SFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPE--LAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGLY------ALDVLLTRLKSQGH | |||||||||||||
10 | 5ugqA | 0.08 | 0.07 | 2.97 | 0.96 | PROSPECTOR2 | YDRPDGDESGIEAALGVFQTLPKRVHERFDLVGPAIWCNSDADNDRLRAEPQVDYSREGVAHIENETKQFVGRCVDKGKNFLAHVGTVNGAVDPNADPIEAELRQAKGFQDAFNNYAADCAKNAGCPLGADPDPLVDPDNPRISRPARTKDPRGLSYSDAIVGTIALYSPNLWELVDNRGDTLLALADYRRDSHGRYNNSGDARVAINCVDQPPVTDIAPFSYGKFTGDAPLGTCAFWPVPPTSQPHAVSAPDLANQLRGSLLTFDGTQHTVVFQ------GDSCIDEYVTAYLIGGT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |