>PF15133 (296 residues) MLSETFLCAIPYLQEDENGATPHCESIQGKRMHEMTSLCDNTDSPNGTTQSRSLFKRYRS LGRLVTSLRPEEGREYRKEVFTQPGRNKVPERQLSPVVDIPRGSSVSKETYLVPSSCKSI CKNYNDLHIAGDQVMPIGSKSTDFTYDSSFDFCDGPFLQSSEIPPPLESLKSSKEFLSRP TGPDSSLWRGGSIRYKSIIQGLQPLSNSMLNDYLEQKVLELYKQYLMDSMVNSASPTKIM ASELIMNNLDQITLQISKEQNMETTKAKDMVISCLLRVASGKQSTELSTPNLQISS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MLSETFLCAIPYLQEDENGATPHCESIQGKRMHEMTSLCDNTDSPNGTTQSRSLFKRYRSLGRLVTSLRPEEGREYRKEVFTQPGRNKVPERQLSPVVDIPRGSSVSKETYLVPSSCKSICKNYNDLHIAGDQVMPIGSKSTDFTYDSSFDFCDGPFLQSSEIPPPLESLKSSKEFLSRPTGPDSSLWRGGSIRYKSIIQGLQPLSNSMLNDYLEQKVLELYKQYLMDSMVNSASPTKIMASELIMNNLDQITLQISKEQNMETTKAKDMVISCLLRVASGKQSTELSTPNLQISS | |||||||||||||||||||
1 | 2tmaA | 0.10 | 0.09 | 3.39 | 1.52 | Neff-PPAS | ----------AIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRI---QLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKM--------EIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYKAISEELDHALNDMTS | |||||||||||||
2 | 1vt4I3 | 0.19 | 0.08 | 2.74 | 1.12 | HHsearch | --------------------------------------------------------------------------------------------------------------------------EYALRSIVDHYNIP-------------------KTFDSDDLIPPYLDQYFHLKNIEHPER--MTLFRMVRFLEQK-IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYE--------RLVNAILDFL------PKIEENLICSKYT--DLLRIALMAEDEIFEEAHKQVQ- | |||||||||||||
3 | 4btgA3 | 0.08 | 0.08 | 3.28 | 1.11 | PROSPECTOR2 | GLTQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSELRTATYPFDANAVVSSVLTILGRLWSPSTPKELDPSARLRNTNGIRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRSATLAPIGNTRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNKPIQPSEVLQAKVLHIWP | |||||||||||||
4 | 4btgA | 0.12 | 0.11 | 3.96 | 0.99 | SPARKS-K | CVRASDLRMLTALSSVDSKMLQATFKAPALISQHLANAA--TTAFERSRGNFDAPSTPKELDPSARLRNTNGIDVKQRGRAEVIFSDEELSSTIIPSEVSPFKLRPINETYIGQTSAIDHMGQPSHVVVYEDWQFA--KEITAFTPVKLANNSNQRFLDSATLAPIGNTFAVSEAVSQRGTVGAEMTLGFPSVVERDYALDRDP---MVAIAALRTDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAQGSLYLVWNVRTELRIP-------VGYNAIEGGSIRTPEPLEAIAY | |||||||||||||
5 | 4xd7G | 0.11 | 0.07 | 2.70 | 0.54 | FFAS-3D | ---------------------------------------------ASLRDIKTRINATKKTSQITKAEVSTSKLNRAEQNAKSFVPYEKIQEVVANV--ALVSRPVKKTGYLVITSDRGLAGAYNAIIVIGRVGLS--------------------FFRKRNVILDITRLPDQPSFADIKEIHYVSAIQQEVTERKLLPLTQEEILDVLLPQYAESLIYGLLDAKASEHAAR------------TAKNATDNANELIRTLTLSYNRARQAAITQEITEIVAGANA----------- | |||||||||||||
6 | 2pffB | 0.12 | 0.09 | 3.22 | 0.42 | HHpred | -HSQGLVTAVAIAETDSWESFFVSVRKAITV-LFFIVRCYEAYPNTSLPP--SILEDSLENNEGPSPSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNG-------AKNLVVSPPQSLYGLNLTLRKADQSRIPFSERKL--KF-------SNRFLPV-ASPFHSHLLVPASDLNKDLV-----KNNVFNAKDIQIPSDLRVLSGSISERIV-------------DCIIR-------------LPVKWETTTQFKATHILDFGGASGVLTHRN--------------------- | |||||||||||||
7 | 6d4hA | 0.08 | 0.08 | 3.05 | 0.84 | MUSTER | VLTEALLQHLDSALQASKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPA---TAPNKN-STKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHFQLMTPKQMYEHFKGYEYVSHINWNEDK---AAAILEAWQRTYVEVVHQSV-------AQNSTQKVLSFTTTTLDD-ILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAG | |||||||||||||
8 | 4c0eA | 0.11 | 0.02 | 0.86 | 0.55 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QMLVTEVSPEARYYLVSSMVNELRYPNAYTNYFSQALL-------DIFGHDMSDPEENLVREQIVRVLLERV----------------- | |||||||||||||
9 | 2pffB | 0.16 | 0.16 | 5.16 | 0.82 | HHsearch-2 | LLVPTASFFIASQLQEQFNKILP-EPTEADDEPTTPYVSLVEPSKVGQFDQ--VLNLCLEFENCIHALAAKLLQENDKKELIKNTARIMAKRPFDKKSNSALFEGNAQLVAIFDYFEEDLYQTYHVLV--GD-LIKFSAIRTDAEKLEWLNTPDKDYLLSIPISCPLIGVIQAKLLGFTPG-ELRSYLKGATGHSQGLTDSWESFFVSVRKA---ITVLFFIGVRCYEAYPNTSLPPSILEDSLVPSPLSISNLTQEQVQQVEINGAKNLVVSYNLTLRKAKAPSKFSNRFLPVAS | |||||||||||||
10 | 2bsgA | 0.08 | 0.08 | 3.03 | 1.38 | Neff-PPAS | ---EGSMNRPTVSVLRNVEVLDKNIGILKTSLETANDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIEVGNLREEL--VYSRLNEIDTKQTTVESDISAIKTSISIIT---------SVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTI-----ETSVSGLNNAVQNLQVEIGNNQVVALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |