>PF15019 (244 residues) FLANHTLNGEILRNAESGAIDVKFFVLAEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE LSFYLPLHRVCVDRLTHIIRKGRIWMHKGQSIIPMLTGEVIPVMELLSSMKSHSVPEEID ISDTVLSDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSSTEKVNKIVRTLCLFLTPSER KCSRLCRNESSFKYESGLFVQGLLKDATGSFVLPFRQVMYAPYPTTHIDVDVNTVKQMPP CHEH |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | FLANHTLNGEILRNAESGAIDVKFFVLAEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTELSFYLPLHRVCVDRLTHIIRKGRIWMHKGQSIIPMLTGEVIPVMELLSSMKSHSVPEEIDISDTVLSDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSSTEKVNKIVRTLCLFLTPSERKCSRLCRNESSFKYESGLFVQGLLKDATGSFVLPFRQVMYAPYPTTHIDVDVNTVKQMPPCHEH | |||||||||||||||||||
1 | 6ekkA | 0.14 | 0.12 | 4.03 | 0.65 | SPARKS-K | QEVLQTLTKFCFPFYVDVGQNFTFVLTDDSKQRFGFCRLS-----SGAKSCFCILSY-------LPWFEVFYKLLNILADYTTK----RQE---------NQWNELLETLHKLPIPDPVHLSRELPSIPENRVAVDVNNMLHLYASMLYER-RILIICSKLSTLTACIHGSAAMLYP----------MYWQHVYIPVLYLIGIHL-------SLMEKVRNMALDVVILNVDTNTLETPFDDLQS | |||||||||||||
2 | 4zy8C | 0.13 | 0.06 | 1.98 | 0.81 | FFAS-3D | -LKDYIFGSIR--TIDYSASSDKIKVVKSANIVLFTRIFYLN-EKSTLRIAISCCVTDDVLPVLTECWPHISSFLDQCENTLLKYLAKNDTQFLPHCIEVAAVLQTFQR--------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 3tw8A | 0.13 | 0.10 | 3.56 | 0.32 | HHpred | --------QSVPKCFPQVGQHFTFVLTDIESKQRFGFCRL----TSGGTICLCILSYL-------PWFEVYYKLLNTLADYL---AKELEN-------DLNET---LRSLYNHPVPKANGLPTTEYFV-----AVDVNNMLQLYAS-MLHERRIVIISSKLSTLTACIHGSAALLYPMY-WQHIYIPLDYCCAPMP--YLIGIHSSL-------IERVKNKLEDVVMLNVDTNTLESPFSLN-- | |||||||||||||
4 | 1dq3A2 | 0.08 | 0.07 | 2.58 | 0.57 | MUSTER | -----------MPDGEDYKFIFDYWLA----FIAGCFDKYHSHVKGHEYIYDRLRIYDYRIETFEIINDYLEKTFGR---KYSIQKDRNIYYIDIKARNITSHYLKLLEGIDNGIPPQIL---------KEGKNAVLSFIAGLFDAEVSNKPGIELGMVNKRLIEDVTHYLNALIK------ARIREKLRKDGIDYVLHV------EYSSLLRFYELIGKNLQN-------REKLEKVLSNHKG | |||||||||||||
5 | 3tw8A | 0.14 | 0.11 | 3.66 | 0.79 | CNFpred | -------------------QHFTFVLTDIESKQRFGFCRLTS----GGTICLCILSYL-------PWFEVYYKLLNTLADYLAKE-------------LENDLNETLRSLYNHPVPK-LPTIPESRNLTEYFVAVDVNNMLQLYASMLH-ERRIVIISSKLSTLTACIHGSAALLYPMYWQYIPVLPPHLDYCCAPMPYLIGIHSS-------LIERVKNKSEDVVMLNVDTNTLESPFSDLNN | |||||||||||||
6 | 4zy8C | 0.12 | 0.05 | 1.89 | 0.73 | HHsearch-2 | YIFGSIRTI------DYSASSDKIKVVKSANIVLFTRIFYLNE-KSTLRIAISCCVTDDVLPVLTECWPHISSFLDQCENTLLKYLAKN----------------------DTQLP--HDWN-----------CIEVAAVLQTFQRKIIPLLS------------------------------------------------------------------------------------------- | |||||||||||||
7 | 6f1ti | 0.10 | 0.09 | 3.17 | 0.64 | Neff-PPAS | -RGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE-TLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPP-------EKMRELERKFVKDFQDYMEPEEGDNVLTHNLGIEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSEEKNLDLLYKYIVHFTTDNEKKIAILHENFTTVKPE------DAYEDFIVFLMKQQSLLAKQ----------------------- | |||||||||||||
8 | 4zy8C | 0.15 | 0.07 | 2.34 | 0.67 | HHsearch | GGFRHILKDYIGSTIDYSASSDKIKVVKSANIVLFTRIFYLNE-KSTLRIAISCCVTDDVLPVLTECWPHISSFLDQCENTLLKYLAKNDTFWN--CIEVAAVLQTFQRKII---PL-LS---------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 1st6A | 0.11 | 0.10 | 3.73 | 0.53 | SP3 | IDSKMNQAKGWLRDPNAPPGDAGEQAIRQILDEAGKAGELCAGKERREILGT-----CKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSAIAKKIDAAQNWLADPNGGSEG-EEHIRGIMSEARKVAELC----EEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAIATSLQNLQSKTNRAVANTRPVKAAVHLEGIEQAQRWIDNPTVDD | |||||||||||||
10 | 4zwnA | 0.04 | 0.04 | 1.90 | 0.78 | PROSPECTOR2 | -------SAPYPYKVQTTVPELQYENFD--GAKFGYMFWPVQNGTNEVRGRVLLIEYTKIQFRLMDHEYHVFNDLEHFVEKNLSECKAKGIYACQIILHPHTMYNKPTQIIAPLLAKFSPRVRIDTGLDLKGITSDKAYRAFLGSDPMSVPLYGS-----FRQIHDFMQRGAKLYKNENNYIQKNFAKD-----KPVIIMHG-----QDDTINDPKGSEKPSADKELKLYPGASIFSLETTTTE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |