>PF14994 (272 residues) MGQRRQAKFQYGKSKTSRTSPVKFEKETIVDSDEIFDAVGQSKFVLENLHHYTVHPNLAQ YYEPLKPTALHKFLARNRKIQSFTLKVTEYDQDKTLLIMTNNPLPCSIDHQGKDMTSKYF SSELLLKESHPHKPTENFFLPLMYQKKKLRSGLKPVFPVTLLEDPKSKREQWFRFSTDKD FKSEGKYSKICALRKQKKMYPQLNFAPVCKRDLRSDVSKKSGSDLPTSQMIWEPLTLSSL LEEKPTRTAPGESAFRNGRAQQWIIKNASVIK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MGQRRQAKFQYGKSKTSRTSPVKFEKETIVDSDEIFDAVGQSKFVLENLHHYTVHPNLAQYYEPLKPTALHKFLARNRKIQSFTLKVTEYDQDKTLLIMTNNPLPCSIDHQGKDMTSKYFSSELLLKESHPHKPTENFFLPLMYQKKKLRSGLKPVFPVTLLEDPKSKREQWFRFSTDKDFKSEGKYSKICALRKQKKMYPQLNFAPVCKRDLRSDVSKKSGSDLPTSQMIWEPLTLSSLLEEKPTRTAPGESAFRNGRAQQWIIKNASVIK | |||||||||||||||||||
1 | 2tmaA | 0.08 | 0.07 | 2.94 | 1.48 | Neff-PPAS | ---KLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNR---RIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD-----LERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISE | |||||||||||||
2 | 2pffB | 0.14 | 0.13 | 4.38 | 1.06 | HHsearch | FSLSELIRTDAEILEWLENPSNTPDKDYLLSIPIS----CPLIGVI-QLAHYVVTAKLLG----FTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFYEAYPNTSLPPSILEDSNNEGVPSPMLSISNLTQEQVQDSHLPAGVEISLVN-G------------AKNLVVSGPYGLNLTLRKAKAPSGQSR-IPFSERKLKFSNRFPVASLVPASDVKNNVSF-NAKDIQIPVYDTFDGSDLRVGSISKWKATHILDF- | |||||||||||||
3 | 6buaA | 0.07 | 0.06 | 2.31 | 0.84 | SPARKS-K | DPVKTFNMYVQSKGRARTTEALFTADK---EREKTIQQIYQYRKAHNDIAEYLKD---------RVLEKTEPELYEIKICYAYEIFLEPQ------------------FESCEYTEHMYL----NLQTPR----NYAILLRNLPRLAEMPLFSNQGKLHVRVANAPLEVII----QNSEQLELLHQFHGMVFRDILKIWHPFFVLDRR-SKENSYLVVPLILGAGEQKCFDWE--LMTNFRRLHGSNVQQREQQPAPRPED---FEGKIVTQ | |||||||||||||
4 | 2qyfD | 0.11 | 0.06 | 2.27 | 0.38 | FFAS-3D | ---------------------VPVVFPGPVSQEGCCQFTCE---LLKHIYQRQQLPLPYEQLKHVSSRKCQQALAELESVLSHLEDFFARTLVPRVLILLGGNADLSLLALSTAACLRRLFRAIFADAFSELQAPPLGGEDWFRPKLNYRVPSRGHKLTVTLSIRTTAWEDYIWFQAPVTFKG----------------------------------------------------------------------------------------- | |||||||||||||
5 | 3by9A | 0.11 | 0.09 | 3.32 | 0.64 | MUSTER | ---------RFQYQALLNEHQSQLDR-----SSHIVATLDKYAHIPHLISK---DKELVDALLSAQIDITNRYLEQVNEVIQAAD-TYLIDRFG-NTIASSNWNLDRSFIGRNFAWRPYF------YLSIAGQKSQYFALGSTSGQR-VIYAAEILKDLSAIEQ-GWQNKSSYFVATDDHFSSQPAWPAQLNDIRQSQQYLDSPIPSLGWQGDLQAEQSEWRKPEKHWLQ--DDYIVSS-------RPLPELA---------LTIRVLSPKI | |||||||||||||
6 | 4obuA | 0.10 | 0.04 | 1.62 | 0.61 | CNFpred | ---------------------------------------LKLWLTLQVLGSDLIGSAIEHGFQ--LAVWAEEALNP---KKDWEIVSPAQ---MAMINFRYAPK--DLTKEEQDILNEKISHRILES-------------------------GYAAIFTTVLN-----GKTVLRICAIHPEATQEDMQHTIDLLDQ---------------------------------------------------------------------------- | |||||||||||||
7 | 2pffB | 0.19 | 0.18 | 5.95 | 0.97 | HHsearch-2 | IASQLQEQFNKILPEPTEGFAAELVGKFLVSSLVEPSKVGQFDQVLNCLNCYLEGNDLAAKLLQEKTKELIKNYITAKKSNSALFRVGEGNAQLVAIFGQGNTDDYFEELRDLYQTYHVLVGDLIKFEELIANPSNTPDKDSIPISGELRSYLKGALPPSILENNEGVPSSNLTQEQVQDY---VNKTNSHTLRKAKAPSGLQSRIPFSERKLKFSNRFPVASLVPASDVKNNVSF-NAKDIQIPVFKATHILDFGPGGGVRVIVAGTLDIN | |||||||||||||
8 | 2bsgA | 0.07 | 0.07 | 2.74 | 1.08 | Neff-PPAS | --SEHTEILNGTNNTVDSILADIIRNDLLWIKRELHRIINNTDVITSQGIRLSLTIEVGNLREELKQTTVESDISAIKTSISIITSVNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNN---SAGIKGQVVALNTL------VNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDGQAYVRKDGEWVFLSTFL-- | |||||||||||||
9 | 1w2b5 | 0.23 | 0.03 | 0.92 | 0.41 | HHsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETAVKSELVNVAKKVRIDG---FRKGKVPMNIVAQRYG-- | |||||||||||||
10 | 6fmlG | 0.08 | 0.07 | 2.94 | 0.71 | SP3 | CGHFAETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALL-----------PAPDHDKQRFTNITVPSMARFVTDSGKLAK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |