>PF14953 (279 residues) SCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQNRLLSLLELIREGLP VFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPPKMVTQSKESNLGMQ LRSIQKLFSSTFPLDDSNTDTTTVLDEANSSQTSLCIDLSCCLQDTKVTIPTLNGWLLDY PVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSHLEELTSFSVPYDLSMEGSK EVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | SCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQNRLLSLLELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPPKMVTQSKESNLGMQLRSIQKLFSSTFPLDDSNTDTTTVLDEANSSQTSLCIDLSCCLQDTKVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTTEKDSHLEELTSFSVPYDLSMEGSKEVWAEKFLERMSSRWEECKHIWRSLDLQVSECYPQAIVL | |||||||||||||||||||
1 | 5h5yA | 0.09 | 0.08 | 2.97 | 0.57 | SPARKS-K | -----------SQTVSFAGKEYELKVIDEKTPILFQWFEPNPERLDNVTNAARIESDRM-----IGIFVDGDF-----SVNQKTAFSKLERDFENVMIIYREDVDFSMYDRK----LSDIYHDIICEQRL---RTEDKRDEEKELREISKAQDSLISMYAKKRNHAWFDFFRNLALLKAGGCIYLDMDMILTGK---LGT--IYAPDISMHVDRRNDSVNIENSAIIVNRSSKVDAHPYYDGLGKGVKKYFNHFCDFIEFNHPNIIM------------ | |||||||||||||
2 | 3wt1A | 0.11 | 0.08 | 2.99 | 0.74 | FFAS-3D | --------EIGPETYSDY------MSAGIPLAYIFA---ETAEERKELSDKLKPIAEAQR--GVINFG-------TIDAKAFGAHAGNLKTDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFV-----AGKIEPSIKSEPIPEKQEGPVTVVVAK----------NYNEIVLDDTLIEFYAPPKYEELGALYAKDRVVIAKVDATANDVPDEIQGFPTIKLYPAPVTYSGSRTVEDLIKFIAENGKYK------------------------- | |||||||||||||
3 | 3qyfA1 | 0.11 | 0.06 | 2.30 | 0.31 | HHpred | -----------QNRIKENFDSLRKLLKFIR----SKGRRASA----ELDSLFSTFEKLKHNSEIYVFLYSTNT---SNSQLAGEVIRDYLIEEGRSELVTVKTIS-----S--EENFYEGIVDLFDKVIYRILKF-K------------EQDNEVYINATPG-LKPESIFLTLAGLLAGADIYYKYQEFN---DVVILPSPPI---------------------------------------------------------------------------- | |||||||||||||
4 | 6d4hA | 0.12 | 0.11 | 3.94 | 0.67 | MUSTER | PFLLKPKAKVVIFLFLGLLGVSLYGTTRVRDGL--DLTDIVPR--TREYDFIAAQFKYFSFYN--MYIVTQKA--YPNIQHLLYDLHRSFSNVKYVM-----LEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPNSDDGVLAYKLLLTKQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDK---ADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSFWEQYIGLRHWLLLFISV | |||||||||||||
5 | 4iz6A | 0.12 | 0.09 | 3.28 | 0.75 | CNFpred | ---------------AELYITFFALLKLGVAPVLALFSH----QRSELNAYASQIE-------PALLIADR-RVVQLLNDNLQDAINHPA-PADEVAYFQLSGGTPKLIPRT-HNDYYYSVRRSVEICQFT--------------------QQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEQVNVTALVPPAVSLGESRAQLASLKLLQVGGAR----------LSATLAARIPAEI--------GCQLQQVFGMAEGLVN | |||||||||||||
6 | 1unnC | 0.10 | 0.04 | 1.32 | 0.40 | HHsearch-2 | --------------------------HHVGVERTEDIH--HWS---ECEAIIERLYKVKPDLARQGVKLKFDDFQ--------------------Q--TTQEHVWP---RLN-KADLIATARKT---WDERR--GGRGV----------R-LV--GLHVTLLDPQMERQL-VLGL-------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 1ii0B1 | 0.07 | 0.06 | 2.61 | 0.61 | Neff-PPAS | --------------KTSISCATAIRLAEQKRVLLVS-TDPASNVGQVFSQTIGNTIQAIASVPGLSALEID------PQAAAQQYRARIVDPIKGV----LPDDVVSSINEQLSGACTTEIAAFDEFTGLLTDASLLTRGAWSSFIDSNPEGASCLGPMAGLEKQREQYAYAVEALSDPKRTRLVLVARLQKSTLQEVARTHLELAAIGL---------KNQYLVINGVLPKTEAAN---DTLAAAIWEREQEALANLPADLAGLPTDTLFLQPVNMVG | |||||||||||||
8 | 5bxbA | 0.12 | 0.04 | 1.40 | 0.28 | HHsearch | -------------------------------------------------------------ANAPVHIDVGGHMYTSSLATLTKRIGRLFDGTKQHYFIDRDGQ---------------MFRYILNFLRTSKLL--I------------PDDFKDYTLLYE--EAKYFQLQPMLLEMERWKQ-----------------DRE----------------------------------------------------------------------------- | |||||||||||||
9 | 4perA1 | 0.11 | 0.08 | 3.00 | 0.68 | SP3 | --VGDNK--IGDTGLALLCQGLLHPNCKIQKLWLW-DCDLTSASCKDLSRVFST-------KETLLEVSLIDNN--LRDSGMEMLCQALKDPKAHLQELWVRECG---LT-------AACCKAVSSVLSVNKHLQVLHIGENKLGNAGVEI-------LCEGLLHPNCNIHSLW---LGNC---DITAACCATLANVMVTKQLT--ELDLSYNTLEDEGNPNCKM------QQLILYDI--FWGPEVDDELKALEEARP----DVKI------------ | |||||||||||||
10 | 4ltyC | 0.09 | 0.08 | 3.10 | 0.80 | PROSPECTOR2 | IEGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIDTGSPPSYARTLYNRFVVNLQQTGC------------HLVVLTLNESRDIMAFLASAGHAPQILPRRDGTPGAVSQEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIALTTVGASKSDAVRDIYIGTLDAFPAQNFPPAIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFS---------NGKLESVENLNVPTAQLEQQEPPVWLHDIQRKIQALT-------ESLPVEV-------LLV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |