>PF14940 (249 residues) LRSYINNRPPLVIFMITVSALAIAFLTIGYFFKIKEIKSPELTEDWNTFLLRFNELDFCV SENETIKHGLNESTTPESMVVTSGQTRSSTQAPLLLEDSGPINISVPITLTLDPQRPFGG YSRNITHLYATALGQQLGLSGREAHEEINITFTLPVSWNSDDCVLHGHCEQVVFSTCMTI TASSNIFPVTVQPPHCVPETYTNATSWYKVFTTVRDSDTKYSQDYNPFWCYKGAIGKVYH ALNPKLTVI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | LRSYINNRPPLVIFMITVSALAIAFLTIGYFFKIKEIKSPELTEDWNTFLLRFNELDFCVSENETIKHGLNESTTPESMVVTSGQTRSSTQAPLLLEDSGPINISVPITLTLDPQRPFGGYSRNITHLYATALGQQLGLSGREAHEEINITFTLPVSWNSDDCVLHGHCEQVVFSTCMTITASSNIFPVTVQPPHCVPETYTNATSWYKVFTTVRDSDTKYSQDYNPFWCYKGAIGKVYHALNPKLTVI | |||||||||||||||||||
1 | 5a1uE | 0.11 | 0.10 | 3.73 | 0.72 | SPARKS-K | IYNRVVLEHEEVRAGAVSALAKFGAQSILVLLKRCVM-DDDNERDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLETLEPSQPEKVAATQLAAVPELGPLFKS------SPEPVALTESETEYVICTKHTFSDHLVFQNDQTLENVTVQMEPTEAYEVLSYVPARSLPNQPGTCYTLVALPT------------EDPTAVACTFSCVMKFTVKDCDPNTGEIDEE---GYEDEYVLEDLEVTVADHI | |||||||||||||
2 | 3sokA | 0.10 | 0.06 | 2.10 | 0.54 | FFAS-3D | -------------FTLIELMIVVAIIGILAAFAIPAYNDYIARSQAAEGLTLADGLSDHLESGECKGDANPASGSLGNDDKGKYALATIDGDYNKDAKTADEKNGCKVVITYGQGTAGEKISKL--------------IVGK------KLVLDQFVNGS------------------YKYNEGETDLELKFIPNAVK---------------------------------------------------- | |||||||||||||
3 | 6dnfA | 0.19 | 0.04 | 1.17 | 0.30 | HHpred | ----------PVTYLV---GLSTLIGGYMWFLWHYQAKGFSL-QDWEGYLEEANAMRREIKA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 2okxA | 0.08 | 0.08 | 3.14 | 0.75 | MUSTER | LTE--EKLYPASIQSLSRVKAPKYAAALDLRNQM----VPESVNHANPVSYCGYVATILTLETSGVVTLGFPTGVRGSGVWVDGVLQTEWTGVQPERYYSLNLAAGEHLVLVDITSSDHGGSSHFAIDSEAAFTLRSPAGDNGVPLATIGTFDQSEYIDHRPGRRMQTDHPDYRALPEAAPTAAALEAFASWVKPFEPSLYTEENVFGSNVWRTLAERRAVPRSVLNAILPVPEPGVLPVFEDGDCELV | |||||||||||||
5 | 2e1qA | 0.11 | 0.06 | 2.03 | 0.65 | CNFpred | --------EVFRGVLEQLRWFAKSVASVGGNIITAS------ISDLNPVFMASGKLTLVSR--------------GTRRTVQMDHTFFPGYRKTLLS---PEEILLSIEIPYSR---------EGEYFSAFKQASRRE-----DIAKVTSGMRVLFKP-----------TTEVQELALCYGGM------------------------------------------------------------------ | |||||||||||||
6 | 5lc5b | 0.16 | 0.02 | 0.80 | 0.50 | HHsearch-2 | LKNVW-AKEPVLVASFAIAGLAVILPTLSPYTKYSLMIN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 3jc8Na | 0.08 | 0.06 | 2.55 | 1.13 | Neff-PPAS | AVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQ-------------------AGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSG----PVRMMDALASATPKKVWVKTFSE----------NNNAVSIDGSAVSHDEVAEFMRG-------LNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDATIEEFPEAQVSPTAKQVGGAQVGVPILVEFKITMTSNY----- | |||||||||||||
8 | 1jb0I | 0.11 | 0.02 | 0.58 | 0.31 | HHsearch | MGSYASFLPWIFIPVVCWLMPTVVMGLLFLYIEGEA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4aq1A2 | 0.10 | 0.07 | 2.56 | 0.70 | SP3 | ----------------------------------------------------------------SVPASATVATSPVTVKLNSSDNDLTFEEGVIDPTQLVKDEDINEFIAVSKAAKNDGYLYNKPLVTVKDASGEVIPTGANVHDATNGNIWFDEEQAGLAKKFSDVHFDVDFSLANVVKTGSGTVSSSPSLSDAIQLTNSGDAVSFTLVIKSIYVKGADKDDNNLL--AAPVSVNVTVTKGS----- | |||||||||||||
10 | 3lifA | 0.07 | 0.06 | 2.46 | 0.89 | PROSPECTOR2 | LAQSETERNLSHSLAEHATHTFQGADVVLDDIVSFKWRPHPSPVFNERLRALADNLPAILDADGQLTYASVKPVPALDNSDRNDDHTLLITGPIQSRTSGVWVFVVSRRLE-------TTDGKFFGVVVATIESEYFSYKTFDLGPGGSISLLHSDGR-------------------LLIQWPSLQTGRDANVLFQKALPRSP-----DGYYLTVSPFDG-----------LTKYLAYRRVSRYPLVVT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |