>PF14907 (251 residues) LDWARLLRLAEHHRVVPAVYLQLKRINHPAIPAELLRNLQAQYQRNTLRMLRLQAEAGRV TRLLMNHGIRVLMLKGPALAQQLYGDVSLRTSKDVDLLIAPDDMDQAEQWMQEAGYVSKS GEARVLGSWKWKDHHASFLHPHKRVEIELHWRLHPDAGGEPSFEDLWKHRQIGEVTATGV PCVYTLGSEHQFLYLSAHGARHGWFRLRWLVDIDRLAVRAVDWEALLPMMRRYGGLPAGG QAWALAAALLG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | LDWARLLRLAEHHRVVPAVYLQLKRINHPAIPAELLRNLQAQYQRNTLRMLRLQAEAGRVTRLLMNHGIRVLMLKGPALAQQLYGDVSLRTSKDVDLLIAPDDMDQAEQWMQEAGYVSKSGEARVLGSWKWKDHHASFLHPHKRVEIELHWRLHPDAGGEPSFEDLWKHRQIGEVTATGVPCVYTLGSEHQFLYLSAHGARHGWFRLRWLVDIDRLAVRAVDWEALLPMMRRYGGLPAGGQAWALAAALLG | |||||||||||||||||||
1 | 4wqkA | 0.11 | 0.07 | 2.61 | 1.06 | SPARKS-K | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRV--TRKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDY------------GFLAEIGDELLDCEPAWWADEAIAEAPQGSCPEAAEGVIA---GRPVRCNSWEAIIWDYFYYADEVPPWPTKHIESYRLACTSLGKVEVLRAAFRSRYAA--------------- | |||||||||||||
2 | 4wqkA | 0.10 | 0.06 | 2.37 | 1.43 | FFAS-3D | ---------------------------------------------------TQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVT--RKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDY------------GFLAEIGDELLDCEPAWWADEAIAEAPQGSCPEAAEGVIAG---RPVRCNSWEAIIWDYFYYADEVPPVPTKHIESYRLA-CTSLGAEKVEVLRAAF------------------ | |||||||||||||
3 | 4wqkA | 0.10 | 0.06 | 2.39 | 1.77 | HHpred | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAI--DARLGRVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEEL----------DYGFLAE--IGDELLDCEPAWWADEEAEAPQGSCPE-AAEGVI-A--GRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLACT-SLGAEKVEVLRAAFRSR--------------- | |||||||||||||
4 | 4wqkA | 0.11 | 0.08 | 2.71 | 1.10 | MUSTER | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAIDARL---RVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDY------------GFLAEIGDELLDCEPAWWADEAYAEAPQGSCPEAAEGVI---AGRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLACTSAEKVEVLRAAFRSRYAA--------------- | |||||||||||||
5 | 5uvdA | 0.13 | 0.09 | 3.19 | 0.96 | CNFpred | -------------------------------------------------SDELKTVVSVLAQKLDSLNIDYAIMGGAATCLLSG--DPNRRTEDVDLVIHVITADNLTTQLLKSFFEGVSQ----------GHTIPAYKLRRTVQLVELEVFDYQSWPQRPQYDLQTATRTTLNIN---GQKVKLFSPEWILREKILSQYQRQ-KEGTDIRDIISMIP-ELNFNQSQ------ELQTALANLVQKRPDLSS | |||||||||||||
6 | 4wqkA | 0.12 | 0.08 | 2.82 | 2.12 | HHsearch-2 | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAID--ARLGRVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEEL----------DYGFLAE--IGDELLDCEPAWWADEAIEAPQGSCPE-AAEGVI-A--GRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLACTGAEKVEVLRAFRSRYAA---------------- | |||||||||||||
7 | 4wqkA | 0.11 | 0.07 | 2.61 | 1.09 | Neff-PPAS | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVT--RKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDY------------GFLAEIGDELLDCEPAWWADYEIAEAPQGSCPEAAEGVIAG---RPVRCNSWEAIIWDYFYYADEVPPVDWKHIESYRLACTSLGKVEVLRAAFRSRYAA--------------- | |||||||||||||
8 | 4wqkA | 0.11 | 0.08 | 2.71 | 3.11 | HHsearch | --------------------------------------------------TTQVTLIHKILAAADERNLPLWIGGGWAID--ARLGRVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEEL----------DYGFLAE--IGDELLDCEPAWWADEAIAAPQGSCPE-AAEGVI-A--GRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLACTGAEKVEVLRAAFSRYAA---------------- | |||||||||||||
9 | 4wqkA | 0.10 | 0.07 | 2.51 | 1.22 | PROSPECTOR2 | TTQVTLIH--------------------------------------------------KILAAADERNLPLWIGGGWAID--ARLGRVTRKHDDIDLTFPGERRGELEAIVEMLGGRVMEELDY------------GFLAEIGDELLDCEPAWWADEAIAEAPQGSCPEAAEGVI---AGRPVRCNSWEAIIWDYFYYADEPVDWPTKHIESYRLAC-------------TSLGAEKVEVLRAAFRSRYAA | |||||||||||||
10 | 5uvdA | 0.15 | 0.11 | 3.76 | 1.46 | SAM | -------------------------------------------------SDELKTVVSVLAQKLDSLNIDYAIMGGAATC--LLSGDPNRRTEDVDLVIHVDHRDNLTTQLLK-SFPSDFEGV---SQFGHTIPAYKLRRPGGTVLVELE--VFDYQPQRPQYDLQTATRTTLNI-N--GQKVKLFSPEWILREKILSQYQRQGSEGTDIRDIISMIPPELNFNQSQE--LQTALANLVQKRPDLSSAL-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |