>PF14649 (290 residues) GIKLLDKISSVPHGELACTVELLILAHDCFSLTCHMEGIVKVLQAARHLTCNHLAPNEQY SLMVRLLTGISRYNDMTYIFDLLHQNHRFEMLLRKKVESNGLLKTALLDYIKRCHPGDSE KHNMVALCFSMCREIGENHEGAARTQLKLIESQSWDESLREVTDLKNSLTKVLTLLKDAA ESYSKDSCVRQALRCVKLAKLVTLQLHLLNGNQYVRLINLSRQELMKHIISLPKFYQASV VAEAYDFIPDWAEVLYKHVIIDGDFTYLEEFKQQGPLQTNLFEEISKKFK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | GIKLLDKISSVPHGELACTVELLILAHDCFSLTCHMEGIVKVLQAARHLTCNHLAPNEQYSLMVRLLTGISRYNDMTYIFDLLHQNHRFEMLLRKKVESNGLLKTALLDYIKRCHPGDSEKHNMVALCFSMCREIGENHEGAARTQLKLIESQSWDESLREVTDLKNSLTKVLTLLKDAAESYSKDSCVRQALRCVKLAKLVTLQLHLLNGNQYVRLINLSRQELMKHIISLPKFYQASVVAEAYDFIPDWAEVLYKHVIIDGDFTYLEEFKQQGPLQTNLFEEISKKFK | |||||||||||||||||||
1 | 4c0oA | 0.12 | 0.11 | 4.04 | 0.77 | SPARKS-K | FNGLLEIARSLDSFLLSPAAVGLLKGTALVLARLPTECLSELCSVQVMALKKLLSQSSDLDRLAVIFRHTNPIQEIWPVLSETLNKRFAVRCVGKGSAALQPLVTQMVNVYHVHQ--HSCFLYLGSILVDEYQGLLDMLQALCIPTFQLLEQ---QNGLQNHPDTVDDLFRLATRFIQRPVTLLRSQVVIPILQWAIASRFLRDLIHTGVANDH----EEDFELRKELIGQVQQLVSQLLHTCCFCLPPDVAEVLWEIMQVDRPCRWLENSLKGLPVTHKQLTDFHKQVT | |||||||||||||
2 | 2xm6A | 0.09 | 0.09 | 3.40 | 1.09 | FFAS-3D | --IWYKKAALKGLPQAQQNLGVMYESVKWFRLAAE-QGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSGLGNDAISAQWYRKSATSGDLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEWYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEAQANLGAIYFRLEEHKKAVEWFRKAAQFNLGNALLQGKG----VKKDEQQAAIWMAEQGLSAAQVQLGEIYGVERDYVQAWFDTASTNDMNLTENRNITEKKLTAKQLQQAELLSQ | |||||||||||||
3 | 6gmhQ | 0.12 | 0.09 | 3.30 | 0.39 | HHpred | -------------------------------------------------VEA-MQ-AESCYQLARSFHVQEDYDQAFQYYYQTQFASSFQMYIYR-----GDKENASQCFVLKAYPNNYETMKILGS---LYAASEDEKRDIAKGHLKKVTQYPWIEQQTDIQGALSAYGTATRILQNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYVTTSYNLARKLYKNILREHPNYVDCYLMARDKG-NFYEASDWFKEALQIDHPSLIGNLLAKQEWGPKKFERILKQ-- | |||||||||||||
4 | 4kvmA | 0.13 | 0.12 | 4.31 | 0.72 | MUSTER | GYKIVDAFESTVPVDTQEESEAMLFMNLVILKKDGVEDAYKHLLSIEKKVLDRVA----LETRAEYELYLSKMEEAKSTIYLLLDRNNLQRAYGYGKVLDSAEWLNLYSQLAKRYPKS-ECPTRLPLEKLEGDEFLTHVDLYLRKKLKRGIPSVDVKSLYKDTKKCKVVEDLVSKYASSLSTTNKFSEDDDNSTTLLWTYYFLAQHFDHVGELE-------EKYVDLAIDHTPLVELFMTKARISKHELQTAMEIMDHARKLQDRFINGKCAKYM-LRNDENELAAKTVS | |||||||||||||
5 | 4hb2C | 0.06 | 0.06 | 2.52 | 0.92 | CNFpred | VVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMETHEGVQDMAC-----DTFIKIVQKCK-----YHFVIQQPRESEPFIQTIIRDIQKTTA-VHTFYKACGIIIS-RNRLLSDLMQLPNMAWDTIVEQSTNPTLLLDSETVKIIANIIKTNVAVCTSMFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIATKTKVRGLRTIKKEILKLVETYISKAR------NLDDVVKVLVEPLLNAVLEDYMNNVARDAEVLNCMTTVVE | |||||||||||||
6 | 1qqeA2 | 0.19 | 0.04 | 1.33 | 0.72 | HHsearch-2 | ------------------------------------------------------------------------------------------------------------------------QFRRGAN---FKFELGEILENDL-----------------------HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQ---------------------------------------------------------------------------------- | |||||||||||||
7 | 1hz4A | 0.08 | 0.08 | 3.23 | 0.85 | Neff-PPAS | AERLAKLALELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLYHSDWISNANKVRVIYWQMTGDKAAAANWLRHPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAKSDAQRVLLDALKLANTGFISHFVIEGEAMAQQLRQLIQLNT | |||||||||||||
8 | 1qqeA2 | 0.19 | 0.04 | 1.33 | 0.66 | HHsearch | ------------------------------------------------------------------------------------------------------------------------QFRRGA---NFKFELGEILENDL-----------------------HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQ---------------------------------------------------------------------------------- | |||||||||||||
9 | 4kvmA | 0.09 | 0.09 | 3.24 | 0.79 | SP3 | VDAFESTINQGVPVDTQEESEAMLFMNLVILK---KDGVEDAYKHLLSIEKKVLDRVAFLETRAEYELYLSKMEEAKSTIYLLLDRNNLQRAYGYGKVLDSAEWLNLYSQLAKRYPKSECPTRLPLEKLE-----GDEFLTHVDLYLRKKLKRGIPKSLYKDTKKCKVVEDLVSKYASSLSTTNKFSEDDDNSQ--------------IEIPTTLLWT---YYFLAQHFDHVGELEKAEKYVDLADHTPTLVELFMTKARISGEMEIMDHARKLDLQDRFINGKCAKYML | |||||||||||||
10 | 1hz4a | 0.11 | 0.10 | 3.52 | 0.93 | PROSPECTOR2 | EERLAKLAEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIEILFAQGFLQTVRIRAQLLWAWARARSGIEVLSSYQPQQQLQCLAMLLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAG-------------RKSDAQRV------LLDALKLANRTGFISHFVIEGEAMA------QQLRQLIQLNTLPELEAQRILREIN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |