>PF14500 (261 residues) VQVLGEFLTNEDGTIRAKGTGLLSTVLADCPQEQVNNAAINVLVDFYCERLSDTASVPEL LQGIESLAHFNSFHNENSLKVAKSIFASVNVQSFQQTTRHYVFQIFDRLLKHHLNALKQM RQDFVTGFIQAMDGEKDPRNLLLAFSLIKLIIHEFDISQHVELLFEVTFCYFPITFKPPP DDPYGITADDLKIALRECLSATPYFAELAMPLLLEKLTSSSGNAKKDSMETLTACAPVYG AKSIVPYLEDLWDYLKDEIVN |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | VQVLGEFLTNEDGTIRAKGTGLLSTVLADCPQEQVNNAAINVLVDFYCERLSDTASVPELLQGIESLAHFNSFHNENSLKVAKSIFASVNVQSFQQTTRHYVFQIFDRLLKHHLNALKQMRQDFVTGFIQAMDGEKDPRNLLLAFSLIKLIIHEFDISQHVELLFEVTFCYFPITFKPPPDDPYGITADDLKIALRECLSATPYFAELAMPLLLEKLTSSSGNAKKDSMETLTACAPVYGAKSIVPYLEDLWDYLKDEIVN | |||||||||||||||||||
1 | 1qgkA | 0.09 | 0.09 | 3.36 | 1.07 | SPARKS-K | IPQLVANVTNPTEHMKESTLEAIGYICQDIDPEQLQD-KSNEILTAIIQGMPSNNVKLAATNALLNSLEFANFKESERHFIMQVVCEATQCPD--TRVRVAALQNLVKIMSLYYQYMETYMPALFAITIEAMK-SDIDEVALQGIEFWSNVCDEETSKFYAKGALQYLVPILTTKQDENDDDDDWNPCKAAGVCLMLLATCCDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKD | |||||||||||||
2 | 1b3uA1 | 0.15 | 0.13 | 4.25 | 1.28 | FFAS-3D | IAVLIDELRNEDVQLRLNSIKKLSTIALALGV----ERTRSELLPFLTDTIYDEDEVLLAL--AEQLGTFTTLGPEYVHCLLPPLESLATVEE--TVVRDKAVESLRAISHEHSPSD---LEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVS-SAVKAELRQYFRNL--------CSDDTPMVRRAAASKLGEFAKELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQL----------------------- | |||||||||||||
3 | 4xrkA | 0.12 | 0.11 | 3.96 | 1.12 | CNFpred | MQPLIAMMEDESIQVRDSTAYALGRITEACSEAIDPNTHLEPLIRSLFNGLMNSKMAASCCWALMNIAERFNPLTPHFNQSVTNLLTVTAPMNGDSTVRTAAYEVLSVFVQNAANDSLSAVASLSTVILQRLEE-ILEDMQTSLCTVLQATVQRLDIAPQGDRIMQVLLQILSTC-------GKSSVPEGVFAAISALANAME-YMEAFAPFLYNALGNQEPSLCSMAIGLVSDVTRSLG-ERSQPYCDNFMNYLLGNLRS | |||||||||||||
4 | 4plqA | 0.11 | 0.10 | 3.76 | 1.03 | Neff-PPAS | LPQMVQQLNSPDQQELQSALRKLSQIASG-GNEQIQAVIDAGALPALVQLLSNEQILQEALWTLGNIASGEQIQAVIDAGALPALVQLLSSPN--EQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLL-----SSPNEQILQEALWTLGNIASGGAVIDAGALPALVQLLSSPNEQILQEALWTLGNIAS-GGNEQKQAVKEAGAEPALEQLQS | |||||||||||||
5 | 4plqA | 0.11 | 0.10 | 3.63 | 1.04 | PROSPECTOR2 | LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDLPALVQLL--SSPNEQILQEALWTLGNIASGGNEQIQAVIDALPALVQLLS--SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAPALVQLLS------------SPNEQILQEALWTLGNIASGGNEQIQAVLPALVQLLSSPNEQILQEALWTLGNIASGGNEQKQAVKEAGAEPALEQEKIQ | |||||||||||||
6 | 4xriA | 0.10 | 0.10 | 3.66 | 1.04 | SPARKS-K | MHALVRNASEGGQHQKQASLTAIGFICETQDTNSLVNAILTAVVQGARKEEPNNEVRFAAITALGDSLEFNFKHEGERNYIMQVVCEATQAQD--SRIQQGAFGCLNRIMALYYEHMRYYMEKALFGLTILGMKSDDEDVAKLAVEFWSTVCEEEITNEVVPVLLQLLT-------KQDEDASEYNISRAAYQCLQLYAQAVSTIIPPVIQFVEHNLRHADWHFRDAAVSAFGAIMDGPEEKVLEPIVKTGMQPLIAMMED | |||||||||||||
7 | 3fgaB | 0.11 | 0.10 | 3.72 | 1.25 | FFAS-3D | --------PLSDLKWKEVKRAALSEMVEYINRNVITEPIYPEVVHMFAVNMAAWPHLQLVYEFFLRFLESPDFQPNIAQKFVLQLLE--LFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALKEEHKIFLLKVL--LPL----HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCV-- | |||||||||||||
8 | 4xriA | 0.11 | 0.11 | 3.98 | 1.11 | CNFpred | MQPLIAMMEDESIQVRDSTAYALGRITEACSEAIDPNTHLEPLIRSLFNGLMNSKMAASCCWALMNIAERFNPLTPHFNQSVTNLLTVTAPMNGDSTVRTAAYEVLSVFVQNAANDSLSAVASLSTVILQRLE-LILEDMQTSLCTVLQATVQRLDIAPQGDRIMQVLLQIL----TCGGKSSVPEGVFAAISALANAMEEFAKYMEAFAPFLYNALGNQEPSLCSMAIGLVSDVTRSLGER-SQPYCDNFMNYLLGNLRS | |||||||||||||
9 | 3ea5B2 | 0.08 | 0.07 | 2.88 | 1.03 | Neff-PPAS | MGLFFRLLEKDSAFIEDDVFYAISALAASLGKGF--EKYLETFSPYLLKALNQSPVSITAVGFIADISNSEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPQIKVLEAVLDAYVGIVAGLHKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFQFYGQDWVIDYIKRTRSGSQATKDTARWAREQQKRQLSL-------------------- | |||||||||||||
10 | 2bkuB2 | 0.11 | 0.11 | 3.86 | 1.02 | PROSPECTOR2 | TDTVAETSNQLTLEDAQSLQELQSNILTRKSPSSVEPVADMLMGLFLLEKKDSAFIEDDVFYAISALAAS---LGKGFEKYLETFSPYLLLNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARPAVLSVFGDIASNIGA-DFIPYLNDIMALC-----VAAQNTKPENGTLEALDYQIKVLEAVLDAFPYVGTIFQFIAQVAEDSEDATSRAAVGLIGDIAAMFPDGSIKQFVIDYIKRQKRQLSL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |