>PF14315 (295 residues) IQRLPLNTSAISVEVTPDIGGRILAIALPGKENFLRQGEAVISEPEPYVAPDADNVGYLA QETWLGPQSQWWTQQLVNPARAQAKAVWPPDPYLILAKNQVVQADKRRVVMRTPASPVSG VVVEKHYALVEGKPDQLHLMARATNIRDTTVAWDIWFNTRVPPSSQVYVPVASQEDVRVE HMENEQRGSLGYRLVDGFFTFVSKAHPDKPGVRGKAFIQPSAGWMAAFREGQVFIIHFPL QPTAVIHPEQGQVELYLDSIPEYPSQGLLEMEVHAPYRKLQPGAHMEAEQTWRLL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | IQRLPLNTSAISVEVTPDIGGRILAIALPGKENFLRQGEAVISEPEPYVAPDADNVGYLAQETWLGPQSQWWTQQLVNPARAQAKAVWPPDPYLILAKNQVVQADKRRVVMRTPASPVSGVVVEKHYALVEGKPDQLHLMARATNIRDTTVAWDIWFNTRVPPSSQVYVPVASQEDVRVEHMENEQRGSLGYRLVDGFFTFVSKAHPDKPGVRGKAFIQPSAGWMAAFREGQVFIIHFPLQPTAVIHPEQGQVELYLDSIPEYPSQGLLEMEVHAPYRKLQPGAHMEAEQTWRLL | |||||||||||||||||||
1 | 3nreA | 0.13 | 0.12 | 3.99 | 1.65 | SPARKS-K | GTIYTLSHGSLKLDVSD-QGGVIEGFWRDT-TPLLRPGK---KSGVATDA----------SCFPLVPFANRVSGNRFVLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYERSGVYHYRVSQAFHLTA---DTLTVTLSVTNQGAETLPFGWHPYFPLSPQTRIQAQASG--YWLERAGEFCEQLPQELDFNQPAPLP--------RQWVNNGFAGWNGQARIEQPQEGYAIIETTP--------PAPCYFIFVSDPAFDKAFDFFCLEPSHALIALAPGESTTSE-SLRVE | |||||||||||||
2 | 5cd6A1 | 0.14 | 0.11 | 3.84 | 1.61 | FFAS-3D | -YRISLENEKVKAIICPDLCGKVISLTHSGKEVLYRPD------VIKYTRILPRFYFVAGGIEVSFPIS---------------------HSPTQNEPVLYIDHTGDRTYVTCGERESHYGQWSVEYSLGDKDEC-LTQRVVYYNPGKQAYPWSSNAALPCAPDTQYDFPNGT-----------------VLSHASTLDTIDGTHHERDIKETGYFWKTKDVNAFGAYTPGSGLYHIADESS-------TPGIKLWSYGVATPDRQPYVEIQGQSIKLELRPGEKKNHVEYWIPT | |||||||||||||
3 | 3k25A | 0.12 | 0.10 | 3.49 | 1.55 | HHpred | PLTYHLEDSLARLSLVPGRGGLVTEWTVQ-GQPILYFDRERFQDP------SLS--VRGGIILFPICGNLPQ-----D-QFNHAGKRLKQHGFARDLPWEVIGQQNARLDLRLSHAFPFAFELVFSYQLQG---HSLRIEQRIANLG-DQRPFGFHPYFFCREKLGITLAIPANDYLDQK-------TGDCHG-YDGQLNLTS-------PELDLAFTQISQPRAHFIDPNLKIEVSFSE---LYQT-----LVLWTVA-----GKDYLCLEPWSQLAWVEPYSSRSAWVNFQVS | |||||||||||||
4 | 3nreA | 0.15 | 0.14 | 4.57 | 1.49 | MUSTER | GTIYTLSHGSLKLDVSD-QGGVIEGFWRDT-TPLLRPG------KKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYERSGVYHYRVSQAFHLTA---DTLTVTLSVTNQGAETLPFGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELD-------NQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIETTP--------PAPCYFIFVSDPAFDKGYDFFCLEPSH-LIALAPGESTTSES-LRVE | |||||||||||||
5 | 3ty1A | 0.11 | 0.10 | 3.66 | 2.56 | CNFpred | SKILTIHSKGLTITLSPTRGMNLLRIEGF-GSRMGWDSPV-KEVVNPAFINL-WLEGFNEMMVRCGYEW-------TGHPVTADGQIYTLHGKAGNTPASLVEVEVYEIRIRGLVK-KADLQTLTELRYVPG-SNSFSLHDVLTNHAPHDYQIIYHSNFGTEEGARFLAPISSISPAKSGLKTWQTYQGPTKDFDEMVFNIQPLADE---NHQTLAAVVNKDKGASIQFDPVLTLWKNTDT------GYVTGIEPGTSYAY-----PVTIERKQKRVKQLQPGASAQFDLTYTLL | |||||||||||||
6 | 5cd6A1 | 0.12 | 0.10 | 3.57 | 1.71 | HHsearch-2 | YR-ISLENEKVKAIICPDLCGKVISLTHKSGKEVLYRPDVIKYT---RILPRFYF-VAGGIE-VSFPI---------------------SHSPNEPVLYQIDH-TGDRTYVTCERESHYG-QWSVEYSLGDKD-ECLTQRVVYYNPGKQAYPWWSNAALPCAPDTQYDFPNGTVLSH-ASTL--DTIDWKTEGTHH------ERD----IKE-TGYFWTKDVNAFGAYTPGSGLYHIADES--STPG-----IKLWSYGVASTPRQPYVEIQDQSIKLELRPGEKKNHVEYWIPT | |||||||||||||
7 | 3nreA | 0.12 | 0.11 | 3.74 | 2.32 | Neff-PPAS | -TIYTLSHGSLKLDVSD-QGGVIEGFWRDTTPLLR-------PGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGYHYRVSQAFHLTAD---TLTVTLSVTNQGAETLPFGTGWHPYFPPQTRIQAQASGLEREQWLAGEFCEQLPQELDFNQPAPLP--------RQWVNNGFAGWNGQARIEQPQEGYAIIETTP--------PAPCYFIFVSDPAFDKGYDDHHRPEGGDLIALAPGESTTSES-LRVE | |||||||||||||
8 | 5cd6A1 | 0.12 | 0.10 | 3.57 | 2.51 | HHsearch | YR-ISLENEKVKAIICPDLCGKVISLTHKEGKEVLYRPDVIKYTR---ILPRFYF-VAGGIE-VSFPI---------------------SHSPNEPVLYQIDH-TGDRTYVTCGRESHYG-QWSVEYSLGDKD-ECLTQRVVYYNPGKQAYPWWSNAALPCAPDTQYDFPNGTVLSHASTL---DTIDWKTEGTH------HERD----IKE-TGYFWTKDVNAFGAYTPGSGLYHIADES--STPG-----IKLWSYGVASTPRQPYVEIQDQSIKLELRPGEKKNHVEYWIP- | |||||||||||||
9 | 3nreA | 0.15 | 0.13 | 4.37 | 1.44 | PROSPECTOR2 | GTIYTLSHGSLKLDVSD-QGGVIEGFWR-DTTPLLRPGKKSGVATDASCFPLVPFANWQGREYQLQPNV--------------EWDAHYLHGDGWLGEWQCVSHSDDSLCLVEHRSGVYHYRVSQAFHLTA---DTLTVTLSVTNQGAETLPFGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFN------QPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIETT--------PPAPCYFIFVSDPAFDKGYAFHHRPEGGDLIALAPGESTTSSLRVEWL | |||||||||||||
10 | 5cd6A1 | 0.13 | 0.10 | 3.54 | 1.60 | SAM | -R-ISLENEKVKAIICPDLCGKVISLTHKSGKEVLYRPDVIKYTR---ILPRFYFV-AGGIE-VSFPI----------------------HSPNEPVLYQIDH-TGDRTYVTCGERSHYG-QWSVEYSLGDKD-ECLTQRVVYYNPGKQAYPWWSNAALPCAPDTQYDFPNGTVLSHASL----DTIDWKTEGHHERDI-----------KE-TGYFWTKDVNAFGAYTPGSGLYHIADES--STPG-----IKLWSYG-----VQPYVEISDQSIKLELRPGEKKNHVEYWIPT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |