>PF14133 (252 residues) TYSNLVDSLSQDEVKKAMESAGITSENIDLFFQSVNDFNTTIEKKSLVKDGFITVDNLKP EYDEVAIQEIWNAKNPKFIGYNCRITSFALMKDLISIGNPNTKNSNNLFMDEDALENSPK KLFNPVEQKYFESLFSFVPTENTKDISIHLNKVKEDWKSKDITFSNKKKASLISVFFHSH EDSYLFIGHAGVLIPTKDGKLLFIEKLSFNEPYQVIKFDNRIELNDYLMNKYDVSWNQPN AKPFIMENDQLL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | TYSNLVDSLSQDEVKKAMESAGITSENIDLFFQSVNDFNTTIEKKSLVKDGFITVDNLKPEYDEVAIQEIWNAKNPKFIGYNCRITSFALMKDLISIGNPNTKNSNNLFMDEDALENSPKKLFNPVEQKYFESLFSFVPTENTKDISIHLNKVKEDWKSKDITFSNKKKASLISVFFHSHEDSYLFIGHAGVLIPTKDGKLLFIEKLSFNEPYQVIKFDNRIELNDYLMNKYDVSWNQPNAKPFIMENDQLL | |||||||||||||||||||
1 | 5lq6A | 0.13 | 0.09 | 3.04 | 0.72 | SPARKS-K | ---------SSQDIISRINSKNIN----NNDSNEVKRIKDALSIELYPQ-----------NLSRDNLKQMARYVN------NCVLLSACLHYNILSSKLD--------------------------SAIVDKIIFGH-ELNQSNSIDEVEKEILNRYDIKR------ESSFIISAENYIAPIGESRHDFNAVVISEYDKYVQFIDSWKTSNI-----LPSLQEIKK----HF-----SSSGEFYVRAYD--- | |||||||||||||
2 | 4l8tA2 | 0.10 | 0.06 | 2.21 | 0.71 | FFAS-3D | TMTSV--LQQLSYFYTTMCQNGLDPELVRQAVKQLVTLNSLFLRKDMCS----CRKGMQIRCNISYLEE-WLKDKNLQNSAKETLEPLSQAAWLLQVKKTTDS-------DAKEIYE-RCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLNSRE----DSSQLML-------------------------------------------------------------------------------- | |||||||||||||
3 | 1vt4I | 0.11 | 0.10 | 3.57 | 0.41 | HHpred | IMSKDAVSGTLRLFWTLLSK---QEEMVQKFVEEVLRINYKFLMIKTE-QRQPSM--MTRMYIE-QRD-RLYNDNQVFAYNVSRLQPYLKLRQALELRPALGSGKTWVALDVCNLKNC----NSPETLMLQKLLYQWTRSDHSSNIKLRIHSIQAELRRLLKSKPY-ENCLLVLLNVQNALSCKILL-------TTRKQVT---DFLSAATTTHIHHSLTPDEVKSLLLKYLDCRPQ-DLPREVLTTN---- | |||||||||||||
4 | 5lq6A | 0.15 | 0.10 | 3.49 | 0.61 | MUSTER | ---------SSQDIISRINSKNIN----NNDSNEVKRIKDA-----------LSIELYPQNLSRDNLKQMARYVN------NCVLLSACLHYNI-------HHRQDILSSKLD-------------SAIVDKIIFGHEQSYSLNSIDEVEKEILNRYDIKR------ESSFIISAENYIPIIGESRHDFNAVVISEYDKYVQFIDKTSNILP-------SLQEIKKHF---------SSSGEFYVRAYD--- | |||||||||||||
5 | 2btwB | 0.14 | 0.10 | 3.37 | 0.67 | CNFpred | ------------EGEKLLLTS-------------------------------------RSREDFFPLSMQFVTQ----NQAYCGVASIIMVLNSLGINAPEVFTQDNFFSNEKTKAVIAPEVVAGMTLDELGRLIVKVNHASDTNIEDFRKQVAENLKQD--------GNFVIVNYLRKEERGGHISPLAAYNEQ---TDRFLIMDVSR-YPPVWVKTT---DLWKAMNTVD------QKTRGFVFVS---- | |||||||||||||
6 | 1vt4I | 0.11 | 0.10 | 3.59 | 0.60 | HHsearch-2 | IMSKDAVSGTLRLFWTLLSK---QEEMVQKFVEEVLRINYKFLMIKTE-QRQPSM--MTRMY-IEQRD-RLYNDNQVFAKNVSRLQPYLKLRQALELRPVLGSGKTWVALDVCNLKNC----NSPETEMLQKLLYQWTRSDHSSNIKLRIHSIQAELRRLLKSKPY-ENCLLVLLNVQNALSCKILLT-----TRF-KQVT---DFLSAATTTHISHSLTPDEVKSLLLKYLDC-RPQDLPREVLTTNPRRL | |||||||||||||
7 | 3umgA | 0.07 | 0.06 | 2.42 | 0.62 | Neff-PPAS | -----WRTGIATAVADYAARHQLAVAFADRWRARYQPSMDAILSG-----------AREFVTLDILHRENLDFVLRESGIDPTNHDSGELDELARAWHV-----LTPWPDSVPGLTAIKAEYLLLDMAKNAGIPWDVIGSDINRKYKPDPQAYLRTAQVLGLHPGE-------VMLAAAHNGDAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAGS-------------------- | |||||||||||||
8 | 2im9A | 0.15 | 0.13 | 4.41 | 0.58 | HHsearch | -NSAAIEEQANSSIRKLYHTLNTT--SMAD---RISQISAYFKGTKYI-L--GSLGEGPARYDQFP--------RYRVDGFDCDTTVLSLALKHTRYKNKRSYINRNHFTDWNNLKDINEKNALINKPQWYNHKTIDIRLQKQNEQEKRLVELKATLETSNVQIPN-GA--VIEIIRPNWDLRELDISHLGFAIWI-NNELFFRQASSQY--GKVV----DVSLIDYLDKARSSP---TIKGINIQVVLPE- | |||||||||||||
9 | 4fmvA | 0.09 | 0.08 | 3.08 | 0.70 | SP3 | KTGNFSKWSPELANAKKASAKGARYDKYTEYAQYLNAYVKYMKDNGVDLYAISDYAQDWTWWTPQEMLNFMKNNAGSI-------------NCRVMAPESFQFLKNMILNDATALDNFYGTSVNNMAYPLYQQKSAGFDDDTTGNIMNMSKEIHDSMVTGNMNATSSGTIYFIYKRVDATATPNT--NVYVSAYTGDNKAVIVAINTGTAA--VSQKFNQNGSASSVVSYVTDSSRNMAAGANIAVTNGSFT | |||||||||||||
10 | 3csqA | 0.10 | 0.09 | 3.27 | 0.82 | PROSPECTOR2 | MVYVSNKKVNAQYILNYLSSNGWTKQAICGMLGNMQSWQNLDEGNTSLGFGL-------VQWTPASNYINWANSQG--LPYKNMDSELKRIIWEVNNNAQWINLRDM---TFKEYIKSTKTP--RELAMIFLASYERPANPNQPERGDQAEYWYKNLSLQLAQFGKTEKYPYYTCVWRGDASAYLAWTHFNVIDGKEYQGWTK-------KPDSCLAGTELHIYD--VFAVNNVEIINGNGYDWKTSDWQDG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |