>PF14100 (259 residues) VRVYAGERLFTEYLFTPDGKYPFFYPVMGPRTGRSVTTCRTEPYPHHSSIFFGCDRVNGG NYWQEGLERGRIASQSVRLLKAAGNAIEFEQECAWQRPDAESPFTDRRRIVITAPTPDRR IIDFDITLRARGKVRIEKTNHSLFSVRMAPELAVTGGGTLTNDAGDQDEKGTFGKPALWA DCRGKWGGATEGVTILSHPANRWSPPPWFTRDYGFFSPTPMYWPEGGSIDLEPDETVRLR YRVLVHSDALSSDEIAALY |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | VRVYAGERLFTEYLFTPDGKYPFFYPVMGPRTGRSVTTCRTEPYPHHSSIFFGCDRVNGGNYWQEGLERGRIASQSVRLLKAAGNAIEFEQECAWQRPDAESPFTDRRRIVITAPTPDRRIIDFDITLRARGKVRIEKTNHSLFSVRMAPELAVTGGGTLTNDAGDQDEKGTFGKPALWADCRGKWGGATEGVTILSHPANRWSPPPWFTRDYGFFSPTPMYWPEGGSIDLEPDETVRLRYRVLVHSDALSSDEIAALY | |||||||||||||||||||
1 | 5cd6A1 | 0.12 | 0.10 | 3.71 | 1.03 | SPARKS-K | ISLENE---KVKAIICP-DLCGKVISLTHKESGKEVLYKYTR-----ILPRFYF-VAGGI-EVSFPISHSPTQNEPVLQIDHTGDRTYVTCGER-----ESHYGQWSVEYSLGDKDE---CLTQRVVYYNPGAYPWS---WSNAALPCAPDTQDFPNGTVLSHASTLDTKETGTKDVNAFGAYTP--SLGSGLYHIADESSTPGIKLWSYGVAPYVEIQGGPISDQSILELRPGEKKNHVEYWIPTDHPLD---IYSLK | |||||||||||||
2 | 3k25A | 0.07 | 0.06 | 2.55 | 1.56 | CNFpred | YHLEDDSLARLSLVPG---RGGLVTEWTVQ--GQPILYFDRERLSVRGGIPILFPICGNLDQFNH-KQHGFARDLPWEVIGQQQDNARLDLRLSHND-AFPFAFELVFSYQLQG---HSLRIEQRIANLGDQRMPFSLGFHPYFFCREKLGITLAIANDYLDQ-LNLTSPELDLAF-PRAHFIDPD--RNLKIEVSFSE----LYQTLVLWTKDYLCLEPWSGP-EQLAWVEPYSSRSAWVNFQVSTE----------- | |||||||||||||
3 | 3ty1A | 0.09 | 0.08 | 3.14 | 1.08 | Neff-PPAS | LRIEGFGSRGWD--SPVKEVVNPAFINLESRNGLGWLEGFN-------EVRCGYEWTGHPVTADGQIYNTPASLVEVEVADSAPYEIRIRGLVKESTFKK-ADLQTLTELRYVPGSN---SFSLHDVLTNHAPILEEGARFLAPISSISPFNDYAKSGLKTWQTYQGPTKQPLADENHQTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDTSYAYPVTIERKQKRVKQLQPGASAQFDLTYTLLHDSAQVAAVEQKI | |||||||||||||
4 | 4ktpA | 0.10 | 0.07 | 2.45 | 1.41 | SP3 | TLLHVDGEPF---IMSEEAA----------------------------------------------------SFERTLDLSQG----VTSRKVSQRMKNGAT-ITIHEEKFASYRKKHAVLMKYTVESDQDTDAVLDTGIDY--------DVWSINGDHLQGHHYFSHPTGD------GVTAKTVSYEDTVTVVETCSLDADASE---------EDYQNPDGSGRTFPLSLEAGKPVTLEKAMIIYSSNDVQDEALLEA | |||||||||||||
5 | 1nssB | 0.10 | 0.09 | 3.39 | 0.96 | SPARKS-K | VDWQKDGKHLI---LGFDSKDAYPGATVGPTAGRILNQNEGPQTLH------GGEESIHTKLWT-------------YEVTDLGAEVQVKFSLVSNDGTNGYPGKIEMSVTHSFDDDNK--WKIHYEAISDKDTVF--NPTGHVYFNLNGDASESAASRFVPLKDRGDIVDIKNTDLDFHPFLLDQLGLDKEQARLTLDDTTDQPSIVIQVHHGGITFECQVSPELGDISLKAGEKYQATTIYSLHTKLEHHHHHH--- | |||||||||||||
6 | 3wvfA1 | 0.12 | 0.10 | 3.54 | 0.74 | FFAS-3D | LDLTIGGDLLPAYPKELNSTQPFQ--LLETSPQFIYQ------------AQSGLTGRDGPDLYNVEKD----------AYVLAEGQNELQVPMTYTDAAG---NTFTKTFVLK---RGDYAVNVNYNVQNAGEKPLE--ISTFGQLKQSITLPHTFRGAAYSTPDEKNENLNISSKGGWVAML----QQYFATAWI--PHNDGTNNFYTANLGN---GIAAIGYKSQPVLVQPGQTGAMNSTLWV--GPEIQDKMAAV- | |||||||||||||
7 | 2wyhA | 0.11 | 0.09 | 3.31 | 0.28 | HHpred | ----------------------FLKVMIQTD-GRLITDKQ-SGLIYDLLRFEDCG--DIGNEYISRQPNHPFYTIKLNIISNTAQVAELEIQQTFAIPIRKAELTLTTLIRMEK---NNPRLQFTTRFDNQMNH--------RLRVLFPTHLKTDIFETVKRPNHPAKNPSNPQHQECFVSLFDG----ENGVTIGNYG-----LNEYEILPTNTIAITLLRSMGDTPE-AQCLGKHSLSYSFESITKQT-QFASYWR- | |||||||||||||
8 | 3ty1A | 0.09 | 0.09 | 3.34 | 0.92 | MUSTER | LRIEGFGSRGWDS--VKEVVNPAFIN-LESRNGLGWLEGFN-------EVRCGYEWTGHPVTADGQIYTGKASLVEVEVADSAPYEIRIRGLVKESTFKK-ADLQTLTELRYV-PGSNSFSLHDVLTNHADYPHDYQPILEEGARFLAPIS-DYAKSGLKTWQTYQGPTKQPLADENHQTLAAVVNKAGDKGASIQFDTRQLPV-KNTDTVKQGYVTSYAYPVTQKRVKQLQPGASAQFDLTYTLLHDSAQVAAVEQKI | |||||||||||||
9 | 4ktpA | 0.09 | 0.07 | 2.53 | 1.53 | CNFpred | --------------------ACIVTDTWDKAKWEELST-----VPNALLTLLHVD---GEPFIMSE------EAASFERTLDL-SQGVTSRKVSQRMKN-GATITIHEEKFASYR--KKHAVLMKYTVESDQDTDAV----LDTGIDYDVWSINGDHLQGHHYF----------SHPTGDGVTAKTVEDTVTVVETCSLD-ADASEEDYQNP--DGSGRTF------PLSLEAGKPVTLEKAMIIYSSN-DVDNPQDEA | |||||||||||||
10 | 2zb6A1 | 0.16 | 0.05 | 1.66 | 0.50 | HHsearch-2 | YDTSRVEHAVVYYVYSPSRSFSYFYPFRLPIKGVPIE-LQVECFTWDQKLWCRHFCVL----ADSES-GGHITHSGMVGM---------GVSCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |