>PF14022 (284 residues) NQHYVPRGYLRGFTIPGEKSLIWQYDKNTGEIFKRPKSVNRICSEFQYYAQKNEDGSTDK ETMENAFHEIEDKTPRIIKKINSLNNAEKVIISEDEKAVLSFFTAMQLTRVPNFRNGIEE MYRKVVEIGLSHQVDKARKDGTLPVSIDSLYKQGKINIDIESFVSLKAMLATAQEGAINL MGKVWHFAMPAKGMSFVTSDNPVFFQAPEKYRELNSQIGPFHPVSEVTLPLSSDLLLIFS PSANYSKSEYDLINMTAVQLDEKDTDNLNKRSILAAKQYVYSSE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | NQHYVPRGYLRGFTIPGEKSLIWQYDKNTGEIFKRPKSVNRICSEFQYYAQKNEDGSTDKETMENAFHEIEDKTPRIIKKINSLNNAEKVIISEDEKAVLSFFTAMQLTRVPNFRNGIEEMYRKVVEIGLSHQVDKARKDGTLPVSIDSLYKQGKINIDIESFVSLKAMLATAQEGAINLMGKVWHFAMPAKGMSFVTSDNPVFFQAPEKYRELNSQIGPFHPVSEVTLPLSSDLLLIFSPSANYSKSEYDLINMTAVQLDEKDTDNLNKRSILAAKQYVYSSE | |||||||||||||||||||
1 | 1f31A | 0.09 | 0.08 | 3.20 | 0.58 | SPARKS-K | AFEIAGASILLEFIPELLIPVVGAFLLESDNKNKIIKTIDNALTKRNVN--------TQFYTIKEGMYKALNYQAQALEEIIKYRYNI---YSEKEKNNFINGCSVSYLMKPLAVEKLLDFDNTLKKNLLNYIDENK--IGSAEYEKSKVNKYLKTIMPFDLSIYTTILIEMFNKYNSEILNNIILNLRYKDNN----------LIDLSGGVELNDKNQFKLTSSKIRVTQNQNVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNNSGWKISIRGNRIIWTLID | |||||||||||||
2 | 5woyA | 0.12 | 0.08 | 2.85 | 0.73 | FFAS-3D | -------------------GKAFLYTKEKVTINVEKIEESKV--------------EEEIAKFRKALEVTQEEIEKIKEKALKE-------FGKEKAEIFEAHL--MLASDPELIEGVENMIKTEADNAVNKVIE---------QNASVMESLNDEYL----KERAVDLRDVGNRIIENLLGVKSVVVIARDLTPFATDEIPAVV-------------GLGNAGDLVIVDGLEGIVIV--------------------NPDEKTVEDYKSKKESYEK------- | |||||||||||||
3 | 2pffB | 0.07 | 0.06 | 2.61 | 0.49 | HHpred | TYHVLVGDLIK-FSAETLAEKVFTQGLNIL-EW--LENPSNTPDKDYLLSIPISC---PLIGV-IQLAHYVVTAKLLFGELRSYLKG-----ATGHSQGLVTAVAI--AETDSWESFFVSVRKAITVLFFIGVRCYESLPPSIEDSLE-NNESPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNG--AKNLVVSGPPQSLYG-LNLTLRKAKAPSG--LDQSRIPFSERKLKFSNRFLPVASP-------FHSHLLVPASDLINKDLVKNNVSFNAKD- | |||||||||||||
4 | 6etxG | 0.09 | 0.08 | 3.13 | 0.74 | MUSTER | RQ----KLLYQALKNLVMQFR----VCNHPELFERQETWSPFHISLKPYHISHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLS-----FPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAV----PLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEP | |||||||||||||
5 | 1nd5A | 0.07 | 0.05 | 1.85 | 0.57 | CNFpred | ------------------------------------------------------------EEFQKRLHPYKDFIATLGKLSGLH------QDLFGIWSKVYDPLYCESVH-EDTMTKLRELSELSLLSLYGIH---------KQKEKSRLQ----------GGVLVNEILNHMKRATQIPSYKKLIMYSAH--DTTVSGLQMALDVY---------NGLLPPYASCHLTELYFFVEMYYRNETQH--------EPYPLMLP-CPLERFAELVGP----VIPQDW | |||||||||||||
6 | 2pffB | 0.09 | 0.08 | 3.21 | 1.17 | HHsearch-2 | DIHALAAKLLQENDTTLVKMAKRPFDKKSNSLF--RAVGEGNAQLVAIFGGQGN---TD-DYFEELYQDLIKFSAETLSELIRTTLDKDYLLSIPISCPLIGVIQLAHVVTAKLLGFTPGELRSYSQGLVTAVIETDSWPPSIEDSLE-NNESPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVN--GAKNLVVSGPPQSLYG-LNLTLRKAKAPSGL--DQSRIPFSERKLKFSNRFLPVAS-------PFHSHLLVPASDLINKDLVKNNVSFNAKDI | |||||||||||||
7 | 4dgkA | 0.05 | 0.05 | 2.19 | 0.92 | Neff-PPAS | --PSAIEELFALAGKQLKEYVELLPV----------TPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLGLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPTSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDLGGEGNKIEAVHLEDGRRFLTQAFVLYFGLNHHHDQLAHHTVLAEDFSLYLHAPCCGSYYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHR | |||||||||||||
8 | 2pffB | 0.09 | 0.08 | 2.97 | 0.97 | HHsearch | TYHVLVGDLIK-FSAETLAEKVFTQGLNIL-EW--LENPSNTPDKDYLLSIPISCP---LIGV-IQLAHYVVTAKGELRSYLKGAT----GHSQ----GLVTAV--AIAETDSWESFFVSVRKAITVLFFIGVYENTSLPPSLEDSLE-NNESPISNLTQE---QVQDYVNKTNSHLPA--GKQVEISLVNGAKNLVVSGPPQSLYG-LNLTLRKAKAPSGL--DQSRIPFSERKLKFS-NRFLPVAS------PFHSHLLVPASDLINKDLVKNNVSFNAKD- | |||||||||||||
9 | 4n9nA | 0.10 | 0.08 | 2.99 | 0.66 | SP3 | --------------YKDTEGY---YTIGIGHLLTKSPSLNAAKSEL---DKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVSLDAVRRAALINVFQETGVAGFTNSLRLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYVDSSPSAWIFHVKGAATILTAVWPL-------SERSK----------FHNIISVDLSDLGDVINPDVG-----------TITELVCFDESIADLYPVGLDSPYLITLAYLDKLHRE--------KN | |||||||||||||
10 | 4dgkA | 0.08 | 0.08 | 3.01 | 0.91 | PROSPECTOR2 | MKPTTPSAIEELFALAGKQTPFYRLCWESGKVFNYDNDQTRL-----------------EAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASEHLRQAFSFHSLLVGGNPTSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDETTGNKIEAVHLEDGRRFSNADSNSLFVLYFGLNHHHDQLAHRLAEDFSLYLHAPCYVLAPVPHLGTANLDWTVEG-------PKLRDRIFAYLEQHYTHRMFTPF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |