>PF13383 (259 residues) DLAASHSFGFFDDIPNETWKLMRSKALAFQHYMYRNSPDIGSERPWFWYLNNLQPDFTCS HVFRVGGHGDGPKWVCDPHRLRKKEDDCLVYSFGSNGQYQFEDGLIDLIGHERCEIHVFD FGNFDRSQNAGRNIHYHKWGLGSSYDEAYNIKLKSSGRHLEILTFQETQQRLNHVNRTID LFKIDCEWCEWSNYKDWVDVDARQILVEVHGLPSTNPATNPLNTKGSDFFNAFRENSYAM FSKELNPYNSECYEIGYIK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | DLAASHSFGFFDDIPNETWKLMRSKALAFQHYMYRNSPDIGSERPWFWYLNNLQPDFTCSHVFRVGGHGDGPKWVCDPHRLRKKEDDCLVYSFGSNGQYQFEDGLIDLIGHERCEIHVFDFGNFDRSQNAGRNIHYHKWGLGSSYDEAYNIKLKSSGRHLEILTFQETQQRLNHVNRTIDLFKIDCEWCEWSNYKDWVDVDARQILVEVHGLPSTNPATNPLNTKGSDFFNAFRENSYAMFSKELNPYNSECYEIGYIK | |||||||||||||||||||
1 | 2py6A2 | 0.12 | 0.09 | 3.28 | 1.10 | SPARKS-K | VRNIPAFQTLAQRLADD---YSVQTLYAVLNFHLTCEPEYYHEVERPYSTLYFRS------------------------GLLRFSDSEK-VDCGASIGE-SLAGLIGVTKGKFERVW-IEPDRINLQTLQNSRITVHGCGAGENTIRVPF-------DLIDVRPIDDII------DDAPTFIK-DIEGSELSALKGISEHKP-KLAISAYHRST----------DLLDLTNYILSIDYQIGLRHHTPDRWDTCLYFY-- | |||||||||||||
2 | 2py6A2 | 0.10 | 0.08 | 3.13 | 0.95 | FFAS-3D | -----------DDWGADIVRNIPAFQTLAQRLAD--------DYSVQTLYAVLNFHLT-CEPEYYHEVERPYSTLYFRSGLLRFSDSEKV---DCGASIGESLAGLIGVTKGKFERVWIEPDRINLQTLQNVLRRYTDTNITVHGCGAGENTIRVPFDLIDVRPIDDII-------DDAPTFIKDIEGSELSALKGAISEHKPKLAISAYHRST----------DLLDLTNYILSPDYQIGLRHHTPDRWDTCLYFY-- | |||||||||||||
3 | 2py6A2 | 0.15 | 0.12 | 3.92 | 1.58 | HHpred | ---------------VDDWGADVRNIPAFTLAQR-LADDYSVQTAVLNFHLTCEPEYY----HEV-ERPYSTLYFRSG-LLRFS-DSEK-VDCGASIGE-SLAGLIGVTGK-FERVW-IEPDRINLQTLRASRITVHGCGAGENTIRVPF-------DLIDVRPIDDIID----D--APTFIK-DIEGSELSALKGARREHKPKLAISAHRST-----------DLLDLTNYILSIDYQIGLRHHTPDRWDTCLYFY-- | |||||||||||||
4 | 2py6A2 | 0.12 | 0.10 | 3.53 | 1.03 | MUSTER | ---------------DYRVDDWGADIVRNIPAFQTLAQRLADDYSVQTLYAVLNFHLTCEPEYYHEVERPYSTLYFRSGLLRFSDSE--KVDCGASI--ESLAGLIGVTKGKFERVW-IEPDRIYTDTNFASRITVHGCGAGENTIRVPF-------DLIDVRPIDDII------DDAPTFIK--IEGSELSALKGARRAKPKLAISAYHRS-----------TDLLDLTNYILSIDYQIGLRHHTPDRWDTCLYFY-- | |||||||||||||
5 | 2py6A | 0.14 | 0.11 | 3.71 | 1.49 | CNFpred | ------------------GADIVRNIPAFQTLAQRL------DDYSVQTLYAVLLTCEPEYYHEVERPYSTLYFRSGLLRFS---DSEKMVDCGASIG-ESLAGLIGVTKGKFERVWMIEPDRINLQTLQ-SRITVHGCGAGENTIRVPF-------DLIDVRPIDDIID------DAPTFIKMDIEGSELSALKGARRAIKPKLAISAYHR----------STDLLDLTNYILSIRYQIGLRHHTPDRWDTCLYFY-- | |||||||||||||
6 | 2py6A2 | 0.16 | 0.13 | 4.25 | 2.16 | HHsearch-2 | ------------DYRVDDWGADVRNIPAFQTLAQRLADDYSVQTLYAVLNFHLTCEPEY--YHEVERPYSTLYFRSGL--LRFS-DSEK-VDCGASIGE-SLAGLIGVTGK-FERVW-IEPDRINLQTLRASRITVHGCGAGENTIRVPF-------DLIDVRPIDDIID----D--APTFIK-DIEGSELSALKGARRHKPKLAISAYHRST-----------DLLDLTNYILSIDYQIGLRHHTPDRWDTCLYFY-- | |||||||||||||
7 | 2py6A2 | 0.12 | 0.09 | 3.28 | 1.02 | Neff-PPAS | DYRVDDWGADIVRADDYSVQTLYAVLNFHLTCEPEYYHEVERPYSTLYFRSGLL-----------------------------RFSDSEKVDCGAS-IGESLAGLIGVTKGKFERVW-IEPDRRYTDTNFASRITVHGCGAGENTIRVPF-------DLIDVRPIDDIIDD------APTFIK-DIEGSELSALKGARRAHKPKLAISAYHR----------STDLLDLTNYILSIDYQIGLRHHTPDRWDTCLYFY-- | |||||||||||||
8 | 2py6A2 | 0.16 | 0.13 | 4.35 | 2.32 | HHsearch | -------DYRVDD-----WGADVRNIPAFQTLAQRLADDYSVQTLYAVFHLTCEPEYY----HEVERPYSTLYFRSGL--LRFS-DSEK-VDCGASIGE-SLAGLIGVTGK-FERVW-IEPDRINLQTLRASRITVHGCGAGENTIRVPF-------DLIDVRPIDDIID----D--APTFIK-DIEGSELSALKGARRHKPKLAISAYHRST-----------DLLDLTNYILSIDYQIGLRHHTPDRWDTCLYFY-- | |||||||||||||
9 | 2py6A2 | 0.13 | 0.10 | 3.50 | 1.24 | PROSPECTOR2 | DYRVDDWGADIVR-NIPAFQTLVQTLYAVLNFHLTCEP--------EYYHEVERPYSTLYFRSGLLRFSDSE-----------------KVDCGASIG-ESLAGLIGVTKGKFERVW-IEPDRINLQTLFASRITVHGCGAGENTIRVP-------FDLIDVRPIDDII------DDAPTFIK-DIEGSELSALKGARREHKPKLAISAYHRST----------DLLDLTNYILSPDYQIGLRHHTPDRWDT--CLYFY | |||||||||||||
10 | 2py6A2 | 0.17 | 0.08 | 2.68 | 1.52 | SAM | -------------------------------------------------------------------------------------DSEK-VDCGASGESLA--GLIGVTGK-FERVW-IEPDRINLQTLRASRITVHGCGAGENTIRVPF-------DLIDVRPIDDIID----D--APTFIK-DIEGSELSALKGARRHKPKLAISAYHRSTDL-----------LDLTNYILSIDYQIG------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |