>PF13249 (290 residues) IQRAQDYLLSIQYPEGYWWGELETNVCMAAEYLLLTHFLGAADRRRWDKIVEYLRRQQLP DGTWSIYHGGPSDLNATVEAYFALKLAGVSPDEPSMAKARQFVLSRGGVPKVRIFTKIWL ALFGQWDWRGVPVLPPELMLLPSWFPINIYEFASWARATVVPMLIILTRRPVCPIPGEAH IDELYPAPREQVDYSLPKSDRLLSWKTLFLTTDKLLRLYERWGWKPFRRRAARAAEEWIV EHQEADGSWGGIQPPWVYSLIALKVLGYPLDHPVMAKGLEGFEGFAIEDE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | IQRAQDYLLSIQYPEGYWWGELETNVCMAAEYLLLTHFLGAADRRRWDKIVEYLRRQQLPDGTWSIYHGGPSDLNATVEAYFALKLAGVSPDEPSMAKARQFVLSRGGVPKVRIFTKIWLALFGQWDWRGVPVLPPELMLLPSWFPINIYEFASWARATVVPMLIILTRRPVCPIPGEAHIDELYPAPREQVDYSLPKSDRLLSWKTLFLTTDKLLRLYERWGWKPFRRRAARAAEEWIVEHQEADGSWGGIQPPWVYSLIALKVLGYPLDHPVMAKGLEGFEGFAIEDE | |||||||||||||||||||
1 | 3sqcA2 | 0.48 | 0.43 | 12.53 | 1.77 | SPARKS-K | ------------------------NVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGG-----GWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDM-TQHPAFIKGWEGLELYGVELD | |||||||||||||
2 | 3sqcA2 | 0.48 | 0.43 | 12.53 | 3.16 | FFAS-3D | ------------------------NVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGGGG-----WIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDM-TQHPAFIKGWEGLELYGVELD | |||||||||||||
3 | 3sqcA | 0.49 | 0.48 | 13.92 | 12.61 | HHpred | LDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGA-----KGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT-QHPAFIKGWEGLELYGVELD | |||||||||||||
4 | 3sqcA | 0.49 | 0.48 | 13.92 | 2.16 | MUSTER | LDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRG-----AKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDM-TQHPAFIKGWEGLELYGVELD | |||||||||||||
5 | 2sqcA | 0.49 | 0.48 | 13.92 | 2.05 | CNFpred | LDRAVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKGG-----GGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT-QHPAFIKGWEGLELYGVELD | |||||||||||||
6 | 1w6jA | 0.23 | 0.23 | 7.14 | 1.47 | HHsearch-2 | ALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARILPAGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVSLQELYVEDFANPPDYQFHINPDGGFGTYVECTSAVMQALKYFHKRPEIRETLTQGLEFCRRQQRADGSWEGFTYGTWFGLEAFACMGQTYACAEVSRACDFLLSRQMADG | |||||||||||||
7 | 3sqcA2 | 0.48 | 0.43 | 12.53 | 2.91 | Neff-PPAS | ------------------------NVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGA-----KGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT-QHPAFIKGWEGLELYGVELD | |||||||||||||
8 | 3sqcA2 | 0.47 | 0.41 | 12.05 | 2.09 | HHsearch | ------------------------NVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVIVMSRQPVFPL----PERARVPELYETDVPPRRRGA-----KGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT-QHPAFIKGWEGLELYGVEG- | |||||||||||||
9 | 2sqca2 | 0.48 | 0.43 | 12.54 | 1.93 | PROSPECTOR2 | ----------------------LSNVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGAKG-----GGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT-QHPAFIKGWEGLELYGVELD | |||||||||||||
10 | 3sqcA2 | 0.48 | 0.43 | 12.44 | 2.62 | SAM | -------------------------VTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALVGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVFPLPERARVPELYETDVPPRRRGA-----KGGGGWIFDALDRALHGYQKLSVHPFRRAAEIRALDWLLERQAGDGSWGGIQPPWFYALIALKILDMT-QHPAFIKGWEGLELYGVEGG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |