>PF13170 (298 residues) NYSELKSNFKWDTSLLKHFCAMMHAARGEKVNIDKIEEIKKYIKQETGWTSDYRGNNGLI IATLLCFEEDYKGFFQKMIEIHEKMKQEGFRKSTYLPLATYTFAEDVPREYWNSKIQRMK EFYKNMKENHFWLTSTDDYVFAAVLAATDLDVRQTMEKVEECYKELNKGGFWKGNDLQTL SHILALGEESVYEKCKKANRLYNKLKNEKCSLRYNGLATLGVLTLIADDEDQIVREIKEV SDFIHKKPGYGIWSLDKYTKTILSANLVCDFYVDGMKKGVIKVALANSINAIIIAQEQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | NYSELKSNFKWDTSLLKHFCAMMHAARGEKVNIDKIEEIKKYIKQETGWTSDYRGNNGLIIATLLCFEEDYKGFFQKMIEIHEKMKQEGFRKSTYLPLATYTFAEDVPREYWNSKIQRMKEFYKNMKENHFWLTSTDDYVFAAVLAATDLDVRQTMEKVEECYKELNKGGFWKGNDLQTLSHILALGEESVYEKCKKANRLYNKLKNEKCSLRYNGLATLGVLTLIADDEDQIVREIKEVSDFIHKKPGYGIWSLDKYTKTILSANLVCDFYVDGMKKGVIKVALANSINAIIIAQEQ | |||||||||||||||||||
1 | 5dseA | 0.07 | 0.06 | 2.53 | 0.91 | SPARKS-K | VLKECIRLKP-DDATIPLLAAKLCMGSLH--WLEEAEKFAKTVVTS-----EFKAKGYLALGLTYSLQGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQ-------IPEALGYVRQALQLQG--DDANSLHLLALLLSAQKHY----HDALNIIDMALSEY-PENFILLFSKVKLQSLCRGPDEALLTCKHMLQIWKSCYLHPWMTLAQIWLHAAEVYIGIGKP-AEATACTQEAANLFP------MSHNVLYMRGQIAELREARRWYEEALAISHVKSMQRLALILHQ | |||||||||||||
2 | 4b4tQ | 0.10 | 0.10 | 3.60 | 1.24 | FFAS-3D | QYNEAEQVYLSDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLV---DVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQAELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSYEKACQVLKYMLL---SKIMLNLIDDVKNILNAKYTKETYQSRGIDAMKAVAEAYNNELTRSHFNALYDTLLESNLCKIIISKI- | |||||||||||||
3 | 5dizA | 0.10 | 0.07 | 2.70 | 1.54 | HHpred | -------------------------------------------------------NPETNLLFNLNSC-SKSKDLSAALALYDAAITSSVRLSQQHFQTLLYLCSASITSLQYLAIDRGFEIFDRMVSSGI---SPNEASVTSVARLAAA--KGNGDYAFKVVKEFVSVGSIPRLRTYA-PALLCFCEK---LEAEKGYEVEEHMEAAGIALEEAEIALLKVSAATGR-----ENKVYRYLHKLRE-YVGCV---SEE-TLKIIEEWFCGEKAGEGVGMLREAVLN------------ | |||||||||||||
4 | 5ganJ | 0.07 | 0.07 | 2.76 | 0.82 | MUSTER | SYHNAKMTLN-QEPEIWIISTLLEERNNPKL-VSLLKEGLLELSKNGY---KATLSAWLKRAEALNDAPNSNLTCQAIVYAILEWLRES-GEYESELNNVDQILEKMPHS------KVQIAVLKKLIQWDP--CDTVLWSRLKMATESYEELLAFFQELLFQTSDDIRANMREKSPGLLMMYVSEYWKAQKGD-TRQTLVLIDQIIDFA-PHNLDLRFFKIKLLGRSLQLDELRDFFQQTFSSLEDFKISGTERLYYKYVNFLRYQDLNEEAIKFLNERCLKSFCHKFFLQLGQIYHS | |||||||||||||
5 | 5i9fA | 0.12 | 0.10 | 3.69 | 1.13 | CNFpred | LFEEMVEKGIKPDVVTYNTLIDGLCKAG---KLDEALKLFEEMVEKG------IKPDVVTYNTLIDGLC---GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA------GKLDEALKLFEEMVEKGI---KPDVVTYNTLIDGLCK---GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA----GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA----GKLDEALKLFEEMVEK----GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMPDVVTYNTLIDGLCK | |||||||||||||
6 | 4wslA | 0.13 | 0.11 | 3.96 | 1.06 | HHsearch-2 | RLEEALELFEEMGPSVVTYNTLIS-GLGKAGRLEEALELFEEMKEKG--IVP----SVVTYNTLISGL-GKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGK------AGRLEEALELFEEMKEKGI---VPSVVTYNTLISGLGK--AGRLEEALELFEEMKEKGIVPSVVTYN-TLISGLGKA---GRLEEALELFEEMKEKGIVPSVVTYTLISGLGKAGR-----LEEALELFEEMKE-KGIVP---S-VVTYNTLISGLKAGRLEEALEEMKEKGSVVTYNTLISGL-- | |||||||||||||
7 | 4gyoA | 0.06 | 0.06 | 2.58 | 0.99 | Neff-PPAS | MLNEIESNLTGLLEYYFYYFRGMYEFKQKNFIIDHYKHAEEKLEYVED--EIEKAEFLFKVAEVYYHIKQTYFSMNYASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAEGYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTECFDLLESRQ------------LLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQ | |||||||||||||
8 | 4wslA | 0.15 | 0.13 | 4.31 | 1.72 | HHsearch | LFEEMKEK-GIVPVVTYNTLISGLGK---AGRLEEALELFEEMKEKG-I-VP----SVVTYNTLISGL-GKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGK------AGRLEEALELFEEMKEKGI---VPSVVTYNTLISGLGK--AGRLEEALELFEEMKEKGIVPSVVTYN-TLISGLGKA---GRLEEALELFEEMKEKGIVPSVVTYTLISGLGKAGR-----LEEALELFEEMKE-KGIVP---SVVTYNTLIEALELFEEMKEK-GIVPSVVTYN---TLISGL-- | |||||||||||||
9 | 5c9sB | 0.09 | 0.08 | 2.96 | 0.93 | PROSPECTOR2 | DWASILDQAQANSSVVWMNYMAFQLQLSE------IEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEK--------FDKAAELFKATAKKFGGEKVSIWVSWGDFLISHNE-----EQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGD---PERGRSLFEGLVADAPKRIDLWNVYVDQEVKAKD-----KKKVEDLFERIITKK------ITRKQAKFFFNKWLQFEESEGDEKTIEYV-----KAKATEYVAS | |||||||||||||
10 | 4wslA | 0.15 | 0.11 | 3.73 | 1.25 | SAM | ---------------------TLISGLGKAGRLEEALELFEEMKEKGIVP------SVVTYNTLISGL-GKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGK------AGRLEEALELFEEMKEKGI---VPSVVTYNTLISGLGK--AGRLEEALELFEEMKEKGIVPSVVTYN-TLISGLGKA---GRLEEALELFEEMKEKGIVPSVTYNTLISGLGKAGR-----LEEALELFEEMKE-KGIVP---SVVTYNTLISGLGKAGRLE------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |