>PF13112 (291 residues) QEIGWYEEANDFMIAQGLAEFVHTSLEYETWDLLTQSVALNYLIIKYRIGELTDRDIEIW DRVKFNEKCITDCKHLLSHKEVLEFTFFYMCKRAKSLSKEQLNSDMMSLAMYCNTFVYDL YTHDLLRKYRKCTDFLSYYGPSQAVLACQRAVLSQISDRLDPLKTTHVDDYLYVMKEMME HMTIGVMDRYGHFIGKLLSYVPFFEMIQVPQHAYYCEELLYICKGIEYKEETLRNYIFIQ LHDCLPSFFRLFLKNKRYATIHDILFYWCDDEQRMSLEKKYNLSFIYEKYA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | QEIGWYEEANDFMIAQGLAEFVHTSLEYETWDLLTQSVALNYLIIKYRIGELTDRDIEIWDRVKFNEKCITDCKHLLSHKEVLEFTFFYMCKRAKSLSKEQLNSDMMSLAMYCNTFVYDLYTHDLLRKYRKCTDFLSYYGPSQAVLACQRAVLSQISDRLDPLKTTHVDDYLYVMKEMMEHMTIGVMDRYGHFIGKLLSYVPFFEMIQVPQHAYYCEELLYICKGIEYKEETLRNYIFIQLHDCLPSFFRLFLKNKRYATIHDILFYWCDDEQRMSLEKKYNLSFIYEKYA | |||||||||||||||||||
1 | 4gyoA | 0.13 | 0.13 | 4.51 | 0.87 | SPARKS-K | EVAVKLNEWYKLIRAEALKQEIEYDLENQDLLLYFSLMEFRHRIMLDKLMP-VKPFSDMLNEIESNLTG--LLEYYFYYFRGMYEFKIDHYKHAEEK-LEYVEDE--IEKAEFLFKVAEVYYHFSMNYASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHELTHLCSALEHARQLYYNVGHCKYSLYKEAEGYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGMYLTKFRLIHELYLLNVLTECFDLLESRQLLADAEDLLHDTAEQLEHYESAAFFYLMNIKKKLA | |||||||||||||
2 | 3sf4A | 0.11 | 0.10 | 3.49 | 0.95 | FFAS-3D | -KSGDCRAGVSFFEASQLGNAYFYLHDYAKAEYHHHDLASGNLNTLKVLGNFDEAIVCCQRHLDISRE-LNDKVGEARALYNLGNVYHAKGKSFGGEFPEEVRDALQAAVDFYEGNLGNTHYLDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIF------LGEFETASEYYKKTLLLADRAVEAQSCYSLGNTYTLLQDYE-----KAIDYHLKHLAIAQELNDRIGEGRAC---------WSLGNAYTALGNHDQAMHFA------EKHLEISREVNLSDLQMV-- | |||||||||||||
3 | 1ovlE | 0.13 | 0.08 | 2.75 | 0.31 | HHpred | -----------------------SGDDTQHIQQFYDLLTGSEIIRG-------------WAEIGFADLPKADQDLLFES-AFLELFVLRLAYRSNPVHRLQCV-------RGFG---------EWIDSIVEFSSNLQN-NIDISAFSCIAALA--VTERHGLKEPKRVEELQNKIVNCLDHVTFNNGLNRPNYLSKLLGKLPELRTLCTQ-GL---QRI-----------------FYLKLEDPPPAIIDKLFLDTL---------------------------------- | |||||||||||||
4 | 5gm6G | 0.13 | 0.13 | 4.40 | 0.70 | MUSTER | VTFGIFNRLLPILLDRSMIKTIDRVLYQLTKPYVHKILVVAAPLLIDEDPMVRSTGQEIITNLSTVKTILTVMRPDIENEYVRNVTSRAAAVVAKALGNAACHWKARHTGIKIVQQIGILLGIGVLNHLTGLMSCIKDCLDHVPVRIVTAHTLSTLAENSYPYGIEVFNVVLEPLWKGIRS------HRGKVLSSFLKAVGSMIPLMDPEYAGYYTTEAMRIIRRFDSPDDEMKKTILLVLEEIAPEFFQKFWV-RRVALDRPLNKVVT--YTTVTLAKKLGCSYTIDKLL | |||||||||||||
5 | 4hb4C | 0.09 | 0.08 | 3.13 | 0.97 | CNFpred | --SETVKIIANIIKTVAVCTSMGADFYPQLGHIYYNMLQLYRAVSSMISAQVAAEGLIA-----TKTPKVRGLRTI--KKEILKLVETYISKAR---NLDDVVKVLVLLNAVLEDYMNNVPDARDAEVLNCMTTVVEKVGIPQGVILILQSVFECTLDMINK-YPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKH----NRDVEVNGLQIA------LDLVKNIERMGNVPFANEFHKNYFF----IFVSETFFVLTDSDHKSGFSKQALLMKLISLVY | |||||||||||||
6 | 1vt4I3 | 0.14 | 0.06 | 2.13 | 0.65 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------EYALH----------------RSIVD--HYNIPKTSDLIPPYLDQYFYSHIGHHLKNIEHPELFRMVDFRFLEQKIRHDSAWNASGSILNTLQLKFYKPYICDN----DPKYERLV-----NAILDFLPKIEENLICSKYTDLLRIALMAEDEA----------IFEEAH | |||||||||||||
7 | 4gyoA | 0.07 | 0.07 | 2.93 | 0.79 | Neff-PPAS | --AVKLNEWYKLIRAFEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMP-VKPFSDMLNEIESNLTGLLEYYFYYFRGMYEFKQAIDHYKHAEEKLEYDEIEKAEFLFKVAEVYYHIKQTYFSMNYASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHE-KALTHLCSALEHARQLEEAYMIAAAYYNVGHCKYSLAIFEEHNFQQAVQAVFSLTHIYCKEGAYDRGIKSAAEWMYLTKFRLIHELYLGSGDLNVLTECFDLLESRQLLADAEDLLHTAERFNQLE | |||||||||||||
8 | 3s4wB2 | 0.15 | 0.11 | 3.80 | 0.62 | HHsearch | KDIVLVFDVIKIRYEKTIFKAIERIEEHKSLDVVMKKGVEK--LLRNKIQCIQEQL---------LDSAFST------HYLVLKD----------------ICPSILLLAQTLFLFGSLLYK----------YAFKFF--D----TYCQQEVVGALVTHVCSGTEAEVDTALDVLLELIVLN-ASAMRLNAAFVKGILDYLENMSPQQIRK---IFCILSTLAFSQQGTSNHIQDDMHLVIRKQLSS---TVFKYKLIGIIGAVTMAGI-----MA--------E------ | |||||||||||||
9 | 5w53A | 0.11 | 0.10 | 3.68 | 0.61 | SP3 | SNIYFFDEFKRYASYHTEIKRYEDIHKTKVNSLLNEASRAIGICNRAKN-TVKGLINILENPQKFKDVKLRQYEEKKEFRGCLLNKNRKNLDQIKKI-NNEIRDLLEKLKCSCQTNVYFDMIKIYLVDFKKYENYDTFIKQYKNSYLSGVDMIRKIEKQID---NPVTINAIKFTQKEMGYI-IDRFEYHLQKVKHSIDQVTALSDGVKPKQV--------------TKNRLKEYYFNIGNYYSIFKFGKDSLNMKALIHKEKIVHNLLGELFGH-LEERIS--------- | |||||||||||||
10 | 5h7cA | 0.13 | 0.13 | 4.43 | 1.04 | PROSPECTOR2 | KFNKEQQNAFYEILEEQRNAFIQSLKDLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELSTDSELVNEIVKQLTDKELVIYIVKILAELAKQSTDSELVNEIVKQVIYIVKILAELAKSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQLPNLNEEQRNAFIQSLKDLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELEIVKQLAEVAKEATDKEEIVKQLAEVAKEATDKELVIYIVKSTDSELVNEIVKQLEEVAKEATVEHIEKILEELKKQS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |