>PF12810 (245 residues) EQNVTLKPGKYKLECWGACGGGWFSEWTKGAKGGYSKAELTLKKETILYVYAGETGCQKF ENSINNWTGFNGGGRGTNAGADPKFILCGGGATDIRLIRGSWSNEQGLLSRILVAGGAGA ISSSDYGVGNGGGMEGSKGFDGSNAFVTGGTQYQGGIGLEDKYNGSFGRASSTGTGQGGG GGWFGGAGGLNYNAAGGSGYALTKDSYKPPGYIPTSKYYLDNVVMTTGGNTTKADGYAKI TLLQA |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | EQNVTLKPGKYKLECWGACGGGWFSEWTKGAKGGYSKAELTLKKETILYVYAGETGCQKFENSINNWTGFNGGGRGTNAGADPKFILCGGGATDIRLIRGSWSNEQGLLSRILVAGGAGAISSSDYGVGNGGGMEGSKGFDGSNAFVTGGTQYQGGIGLEDKYNGSFGRASSTGTGQGGGGGWFGGAGGLNYNAAGGSGYALTKDSYKPPGYIPTSKYYLDNVVMTTGGNTTKADGYAKITLLQA | |||||||||||||||||||
1 | 6f45D2 | 0.16 | 0.12 | 3.92 | 1.35 | SPARKS-K | EEIWEWTGTPVVINIRAHQVSYTP-----GAPL------FEFPGDLYITLNIYAD-------------IYGRGGTGGVAYLGGNPGGDCIHNWILRINNQ---------GWICGGGGGGGGFRVGHTEAGGGGGRGAGGVSSLNLNGDNATLGAPGRGYQLGNDYA-GNGGDVGNPGSAS-------SAEMGGGAAGRAVVGTSPQWINVGNIAGSWL--------------------------- | |||||||||||||
2 | 6f45D2 | 0.16 | 0.13 | 4.32 | 1.07 | MUSTER | EEIWEWTGENHSFNK------IGELRNRGGTP-INIRAHQVSYTPGAPLFEFP--GDLPNAYITLNIYAYGRGGTGGVAYLG---GNPGGDC----IHNWIGNRLRINNQGWICGGGGGGGGFRVGHGGGGGRPLGAGGVSSLNLNGDNATLGAPGRGYQLGNDYA-GNGGDVGNP---------GSASSAEMGGGAAGRA-----------VVGTSPQWINVGNIAGSWL-------------- | |||||||||||||
3 | 6f45D2 | 0.14 | 0.12 | 4.01 | 1.38 | Neff-PPAS | EEIWEWTGENHSFN--KDWLIGELRNRGGTPVVINIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGG---TGGVAYLGGNPGGDCIHNWI-----GNRLRINNQGWICGGGGGGGGFTEAGGGGGRPLGAGGVSSLNLNGDNATLGAPGRGYQLG--------NDYAGNGGDVGNPGSASSAEMGGGAAGRAVVGTSPQWINVGNIAGSWL--------------------------- | |||||||||||||
4 | 6f45D2 | 0.14 | 0.11 | 3.65 | 1.02 | PROSPECTOR2 | EEIWEWTGENHSFGELRNRGGTPVV--------INIRAHQVSYTPGAPLFEFPGDLPNAYITLNIYADIYGRGGTGGVAYLGGNPGGDCWIGNRLRINNQG----------WICGGGGGGGGFRVGHGGGGGRPLGAGGVSSLNLNGDNATLGAPGRG-----------YQLGNDYAGNGGDVGNPGSASSAEMGGGAA----------------GRAVVGTSPQWINVGNIAGS--------WL | |||||||||||||
5 | 6edoA | 0.30 | 0.22 | 6.81 | 1.41 | FFAS03 | ----------------GGGGGGGGGGGGGGGGGGGGGG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------GGGGGGGGGG--------- | |||||||||||||
6 | 6f45D | 0.16 | 0.12 | 3.92 | 1.16 | SPARKS-K | EEIWEWTGTPVVINIRAHQVSYTP-----GAPL------FEFPGDLYITLNIYAD-------------IYGRGGTGGVAYLGGNPGGDCIHNWILRINNQ---------GWICGGGGGGGGFRVGHTEAGGGGPLGAGGVSSLNLNGDNATLGAPGRGYQLGNDYA-GNGGDVGNPGSAS-------SAEMGGGAAGRAVVGTSPQWINVGNIAGSWL--------------------------- | |||||||||||||
7 | 1dabA1 | 0.09 | 0.09 | 3.25 | 1.24 | Neff-PPAS | -IHIQGSDPGGVRTASGT----TIKVSGRQAQGILLENPAAELQFRNGSVTSSGQLSDDGIRRFLGTVTVKAGKLVADHATLANVGDTWDDDGIALYVAGE--QAQASIADSTLQGAGGVQIERGANVTVQRSAIVDGGLHIGALQSLQPEDLPPSRVVLRDTNVTAVPASGAPAAVSVLGASELTLDGGHITGGRAAGVAAMQGAVVHLQRATIRRGDALAGGAVPGGFGPGGFGP-------- | |||||||||||||
8 | 1pdiA | 0.09 | 0.09 | 3.37 | 1.02 | PROSPECTOR2 | LNGRGSTT--------SMRGTTTAGSQSGGDASSALAWNADVIHQRG-----GQTINGTLRINNTLTIASGGANITGTVNMTGGYIQGKRVVTQNEIDRTIWAADSLPSDAWRFCHGGGTRYGGSSSNGRGSHLTNPNVNGNDQFGKPRLGVGCTGGYVGEVQIQQMSYHKHAGGFGEHDDLGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDPESQRNSKYTLNRPELIGNSLNYIIKVKE | |||||||||||||
9 | 6bwdA | 0.40 | 0.19 | 5.66 | 1.13 | FFAS03 | ----------------GGGGGGGGGGGGGGGGGG------------------GGGG----------GGGGGGGGGGGGGGGGGGGGGGGGGG-----------------------GGGGGGGGGGGGGGGGGGGGGGGG---------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------------- | |||||||||||||
10 | 5jwzA | 0.11 | 0.10 | 3.71 | 0.90 | SPARKS-K | ERSGSAGSATQDIYVGVADGGATWSRIPGQPTGYLAHKGVLDSATGHLYLTLSDTGGPYDGGK-GRIWRYDTASGAWQDVSPVAEADAYYGFSGLSVDR---QKPGTLATAYSSWWPDTQIFRSTDSGATWTQAWDYTGYPNRSNRYTLDVSSVPWLSWGASPAPPETAPKLGWTEA------LEIDPFDSDRYGTGATVYGTEDLTGGTFRITPVKGIEETAVNDLASPPSGAPLLSALGDIGG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |