>PF12782 (291 residues) MEVKVTLIVAIVAALAISAHAQRDFNERRGKENDTERGQGGFGGRPGGMQMGSPRQDGGQ MGGRRFDGPESGAPQMEGRRQNGGPMGGRRFDGPRFGGSRPDGAGGRPFFGQGGRRGDGE EETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEEQPFGQRNESSDEDGRPHPRH HGRHHQHHHRNHTEGHQGHNETGDHPHRHHNKTGDGDQDRPMFEMRPFRFNPFGRKPFGD RPFGRRNGTEEGSPRRDGQRRPYGNRGRWGENESEEKEHPTTESVTTSSPP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEVKVTLIVAIVAALAISAHAQRDFNERRGKENDTERGQGGFGGRPGGMQMGSPRQDGGQMGGRRFDGPESGAPQMEGRRQNGGPMGGRRFDGPRFGGSRPDGAGGRPFFGQGGRRGDGEEETDAAQQIGDGLGGRGQFDGHGRGHHGHRQGPPQDRPEEQPFGQRNESSDEDGRPHPRHHGRHHQHHHRNHTEGHQGHNETGDHPHRHHNKTGDGDQDRPMFEMRPFRFNPFGRKPFGDRPFGRRNGTEEGSPRRDGQRRPYGNRGRWGENESEEKEHPTTESVTTSSPP | |||||||||||||||||||
1 | 4nl6A | 0.09 | 0.08 | 2.98 | 1.51 | SPARKS-K | --------------------------------MAMSSGGSGGGVPEQEDSVLFRRGTGQSD-----DSDIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTP--KRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR----ETCVVVYTGYGNREEQSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPP---PP | |||||||||||||
2 | 6fmlG | 0.10 | 0.10 | 3.69 | 1.31 | MUSTER | MDLSATLMNLVMQFRKVCNHFFCGHFAETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTDSGK | |||||||||||||
3 | 1maeH | 0.08 | 0.08 | 3.07 | 1.93 | Neff-PPAS | ------------AAAAAAAAALAAGAADGPTNDEAPGADGRRSNLPAHHSAIIGHVNGGFLPNPVASGSEFALASTSFSRIAKGKRTDADIELPDAPRFDVGPYSWMNANTPNNADSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAML-----TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSG--GRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISV | |||||||||||||
4 | 5gaoE | 0.04 | 0.04 | 2.21 | 1.80 | PROSPECTOR2 | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTSNKK | |||||||||||||
5 | 1zvoC | 0.05 | 0.05 | 2.27 | 1.23 | SPARKS-K | SRNQFSLNLR---------SMSAADTGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVTGYHPTSVTVQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAWLRDKATFTCFVVGSDLKDAHEVAGKVPTGGVEEGLLERHSNGSQSQHSAGTSVLNHPSLPPQRLMALREPAAQAP | |||||||||||||
6 | 4bmlA | 0.08 | 0.08 | 3.20 | 0.63 | FFAS-3D | --VRYATALKLFSGEVFTAFNNASIFKGLVRSYDLRGGKSKQFMFTGKLSAGYHTPGTPIVGDAGIKANSQFVYSLDEIFSQYSTRAATHYDERIARVLAKASAEASPVTGEPGGNIGAGNTNDAQAIVDGFFEAAAVLDERSAPQEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIAGIRILKSNNLAGLYGQDLSSAAVTGENNDYQVDASALAGLIFHREAAG---CIQSVAPTIQTTSGDFNVQYQGDLIVGKLAMGCGSLRTSVAGSFQAA-- | |||||||||||||
7 | 2n28A | 0.19 | 0.03 | 1.11 | 0.33 | HHpred | MQPIVALVVAIIIAIVVWSIVIIEIDRERAEDSGNESEGEIS----ALVELGHHAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6etxG | 0.10 | 0.10 | 3.69 | 1.23 | MUSTER | IEILMYCQKLLYQALKNLVMQFRKVFERQETWSPFHISLKPYHISKFIYRHGQIRVFNHVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITD | |||||||||||||
9 | 2yewC | 0.12 | 0.09 | 3.14 | 0.42 | HHsearch-2 | SQVEVSLSTD-------P----KLLCRTPFSHKPRFIGNEKSPAPTGH----KTRI-----PCKTYSH----------QTDLTRTM-HV----P---PDVPIQ-------------G-LVSNTGKSYSL-DPKTKTIKYKCTC-GETVKEGTATKIDTAPKCITDNTVWSQYVTEVKGKIHVPFPSVAPEPQV--TYRLG----------EVEFHFHPMYPT----LFSIRSLGKDP---------SHSQDTPMSKTIQVGAEGVEYVWGNNNPVRLWAQKSSSSSAHGNP | |||||||||||||
10 | 3iymA | 0.11 | 0.11 | 3.86 | 1.92 | Neff-PPAS | VHKAFPLFGSVSDKYRRNPRYAEFRAHSEFTDGVFGTHLAVSSLLRLAQQMGLPLGDFAPLASSDVRIPSALASVVNQFGEFSSPSIGTRFLLRDFEHSRVVFLADQLWTNGNSHHNDGNFKTIVASRLLEFISAGDLSILPTVLEDAVLSGEVPE-----AWEQVKDLLGDAPGVGQVDRRDRFDFLFKSYADVGQFTTAFTTQAASDVLTELGLPWNSPSAGHLNWQYSTKQRFTFLADTWAKLSAAYSQSSGLATRQSATGSHAQMVDLTSVEGVTVLKAALALSAPE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |