>PF12767 (252 residues) NRRVDLSSMIESFTSYLGRDNWTKYARILSLFILGKLSRKEMTNELDIIFNIPHSNRASL IRLHNQLLLGILTNSLKDSPLSKKGSTWGFQNDSSGINSSSSKLRRVNKHNSQIELYKKI VMSLPITDRNRLKAITREAGKKGFVYCSVLQTRLKNIPKIPIVTNPDTLKRVKTNNLKTP LEWSQDIMNGFNTPLATDNYSLPDADSLYLRMVSIAREHGLVGNVDARGIELLSMALDHY LKNIIEFTIDTV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | NRRVDLSSMIESFTSYLGRDNWTKYARILSLFILGKLSRKEMTNELDIIFNIPHSNRASLIRLHNQLLLGILTNSLKDSPLSKKGSTWGFQNDSSGINSSSSKLRRVNKHNSQIELYKKIVMSLPITDRNRLKAITREAGKKGFVYCSVLQTRLKNIPKIPIVTNPDTLKRVKTNNLKTPLEWSQDIMNGFNTPLATDNYSLPDADSLYLRMVSIAREHGLVGNVDARGIELLSMALDHYLKNIIEFTIDTV | |||||||||||||||||||
1 | 1h3oA | 0.21 | 0.04 | 1.26 | 1.05 | HHsearch-2 | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLLQAPLQRRILEIGKKHGIT-ELHPDVVSYVSHATQQRLQNLVEKISE-- | |||||||||||||
2 | 1h3oA | 0.21 | 0.04 | 1.26 | 1.80 | HHsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLLQAPLQRRILEIGKKHGIT-ELHPDVVSYVSHATQQRLQNLVEKISE-- | |||||||||||||
3 | 2a3vB | 0.11 | 0.10 | 3.59 | 0.77 | SPARKS-K | MGSQFLLSVREFMQTRYAKKTIEAYLHWITRYIHSLMGDKEVEEFLTYLAV-QGKVATKTQSLALNSLSFLYKEILKTPLSLEIRFQRSQLERKLPVVLTDPKRIWQGKGGKNRTTLAKELYPHLKEQIALAKRYYDRDLHQNYGGVWLPTALKEKYPNAPYE--FRWPSFQLSLDPESDVMRRHHMN----------------ETVLQKAVRRSAQEAGIEKTVT---CHTLRHSFATHLLETVQEQLGHT | |||||||||||||
4 | 2q0tA | 0.10 | 0.08 | 3.09 | 0.77 | FFAS-3D | TPQPDPSRLRDELVRLHGPRFVDAYLKFAGVPQRNHLDDKTRAFIALAADACATQLYAPGVARHIERLIEVLELV-------------------------------------STIGIHTSNVGVPVLLEVLEEEGLRKGAPPLDERRQKLKAEFETNRGYWHPTDPDLFEAYVEFSSVPWRTGVLSPKIKEFYCAFDASATHLYVPGLKLHIRN-ALRYGATAEELELLEIVSVTGIHGAELGALEAALK-- | |||||||||||||
5 | 5n9qA | 0.12 | 0.04 | 1.40 | 0.46 | HHpred | SPWMPFPTLFAAISHKVAENDMLLINADYQQLRDKKMTRAEFVRKLRVIVG-------------DDLLRSTITTLQNQPKSKEIP---GSIRD---------H--EEGAG---------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2a3vB | 0.12 | 0.12 | 4.17 | 0.77 | MUSTER | GSQF-LLSVREFMQTRYAKKTIEAYLHWITRYIH--MGDKEVEEFLTYLA-VQGKVATKTQSLALNSLSFLYKEILKTPLSLEIRFQRSQLERKLPVVLTRDEIVDPKHQDFDYGAIKNRTVTLAKELYPHLKEQIALAKRYYDRDLHQKNYGGVWLPTALKEKYPNAPYEFRWHYLFPSFQLSLDPESDVMRRHHM------NETVLQKAVRRSAQEAGIEKTVTRTVQEQLVKTTQIYTHVLDRGASGVL | |||||||||||||
7 | 3ibvA | 0.10 | 0.07 | 2.65 | 0.73 | CNFpred | ---LELQMIRDSVWSYIKEL-SNAVQHLLTLLFLQLYPWNDFFASLQGVIAAS--SQSEFSNFYLKVLLSIGDEIADSLVLKTDVQI---------------------------------------QKDNLVKDAIRAN-----DMSDIVSFVYEMMLAYSNA--------------------NYGTVGLCLQ-VYAQWVSWININLIVEPCMNLLYSFLQIEELRCAACETMTEIVNKKKLNLLNILNLNL | |||||||||||||
8 | 6mzcE | 0.21 | 0.04 | 1.38 | 0.99 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETFLLQAPLQRRILEIGKKHGIT-ELHPDVVSYVSHATQQRLQNLVEKISETA | |||||||||||||
9 | 3i9wA | 0.09 | 0.08 | 3.15 | 0.90 | Neff-PPAS | ---ADNEKMWQAQGRML-TAQSLKINALLQALREQGFDTTAIEQQEQEISRQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDL----------------IEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIED----PGVRAQVATTLTTVSQYSDLLALYQQDSEISN-HLQTLAQNNIAQFAQFSSEVSQLVDTIELRN | |||||||||||||
10 | 6mzcE1 | 0.22 | 0.04 | 1.38 | 1.51 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETFLLQAPLQRRILEIGKKHGIT-ELHPDVVSYVSHATQQRLQNLVEKISET- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |