>PF12271 (298 residues) GFGSFVYLCRNTGSYPFCNLFWRQLSKANFTLPVVTRAPVGILPRCGIPLAGNGRFGNVA DIIFCAISFIFIVYLSQRCLGNAPSITGRIEIRAMFVLYAVLMLLQTVTAGSIFEQGSLP LLILTCLHAGAVAAFFWCLLANAFVATQYVEDGTPSSLIPFYGFAGIFFATTAYISADTA FSYTNLFKSTPPRDLRNIALFILLVIWPAVSVLLYAGIMSYIVVNILGEKRPLMYYLGAL VVFIGAQLAYLFLGTAICQGTNRFIDSAFIATLLETTAMGLLFIGWRTITESKWEDQV |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | GFGSFVYLCRNTGSYPFCNLFWRQLSKANFTLPVVTRAPVGILPRCGIPLAGNGRFGNVADIIFCAISFIFIVYLSQRCLGNAPSITGRIEIRAMFVLYAVLMLLQTVTAGSIFEQGSLPLLILTCLHAGAVAAFFWCLLANAFVATQYVEDGTPSSLIPFYGFAGIFFATTAYISADTAFSYTNLFKSTPPRDLRNIALFILLVIWPAVSVLLYAGIMSYIVVNILGEKRPLMYYLGALVVFIGAQLAYLFLGTAICQGTNRFIDSAFIATLLETTAMGLLFIGWRTITESKWEDQV | |||||||||||||||||||
1 | 3ayfA2 | 0.08 | 0.07 | 2.94 | 1.20 | SPARKS-K | GLLVDLLFWALVVLVGGSMIGQWLGVNGYLGNEWFLLGHQGWEYIELGR------IWQIILVVGMLLWLFIVFRGVKRGLKRESDKG----GLIHLLFYSAIAVPFFYIFAFFIQPDTNFTMADFWRWWIIHLWVEGIFEAVVVIGFLLVQLRLVTKKSTVRALYFQFTILLGSGVIGIGHHYY-YNGSPEV----WIALGAVFSALEVIPLTLLILEAYEQYKMMRDGKATFWFLISTAIWNLVGVFGFLINLPAVSYFEHGHGHAAMMGVYGMFAIAVLLYSLRNIVKPEAWNDKW | |||||||||||||
2 | 6fj3A2 | 0.09 | 0.06 | 2.47 | 1.28 | FFAS-3D | ---------------------------------------------------------GMICTVGYSVSLASLTVAVLILAYFRRLHCTRNYIHMHLFLSFMLRAVSIFVMDAVLYSYAGCRVAVTFFLYFLATNYYWIAVEGLYLHSLIFKAFFSEKKYLWGFTVFGWGLPAIFVAVWVSVRATLANTGCWDLSSGN---NKWIIQVPILASIVLNFILFINIVRVLSTLVLMPLFGVHYIVFMLWQVRMHYEMLFNS------FQGFFVAIAYNGEVQAEIKKSWSR---------- | |||||||||||||
3 | 3rkoB | 0.11 | 0.09 | 3.12 | 1.32 | CNFpred | -------------------------------------------------------LDGLSLTMLSVVTGVGFLIHMYASWYM---EEGYSRFFAYTNLFIASMVVLVLADN--------LLLMYLGWEGVGLCSYLLIGGAAAMKAFVVTRVGDVFLAFALFILATLMLLGGAVGKSAQLQTWLADA----MAGPTPVSALIHAATMVTAGVYLIARTHGLFLLHLVGIVGAVTLLLAGFAARVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQN | |||||||||||||
4 | 6i1rA | 0.08 | 0.08 | 2.99 | 1.06 | Neff-PPAS | DYATIPFLAELFKLSVSGFFLWKECRTSPSVRMTKEWRSVRLYVVPSVIYLIHNNVDPSTYQIMGNLKIVTTGILFRLVLKRKLS------NIQWMAIVLLAVGTTTSQVKGDSPCDSLFSAPLEGYLLGILSACLSALAGVYTEYLMKKNNDSLYWQNVQLYTFGVIFNMGWLIYGDFKAGFELGPWWQRLFNGYSITTWMVVFNLGSTGLLVSWLMKYS-------------DNIVKVYSTSMAMLLTMVLSIYLF---SVKATIQLFLGIIICIISLQMYFMPVHMLIEL----- | |||||||||||||
5 | 3wajA1 | 0.08 | 0.08 | 3.08 | 1.13 | PROSPECTOR2 | SILNPWNSVFTWTVRLGGNRLIENTIHNFPHRIWFDPFTYYPYGSYTHFGIFSATSGESLRAVLAFIPAIGGVPVYLLTREVFDKRAAVHIWEAFWQVSALGTFLLAYNRWKGHDLTARQMAYPVIAGITIGLYVLIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEGMPLAVIVLTALIMGLFFVLTNAVLHFGALFFFGMAGILYSAYRFLKRRSFPEMALLIWAAVYSALALSVVFDKLPNKQWPFQA | |||||||||||||
6 | 5tgzA1 | 0.09 | 0.08 | 3.04 | 1.14 | SPARKS-K | -----------------------------------------GGRGENFMDIECFMVLNVLSLTLGTFTVLENLLVLCVILHRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIHRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDWIGVVSVLLLFIVYAYMYILWKAHSHRMDIELAKTLVLILVVLIICWGPLLAIMVYDVFGKMNKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRS | |||||||||||||
7 | 4or2A2 | 0.07 | 0.06 | 2.34 | 1.27 | FFAS-3D | -----------------------------------------------VRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKRELCYIILAGIFLGYVCPFTL--IAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILARKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRANFNEAKYIAFTMYTTCIIWLAFVPIYFGSKIITTCF------AVSLSVTVALGCMFTPKMYIIIAKPE----- | |||||||||||||
8 | 3rkoC | 0.10 | 0.07 | 2.64 | 1.29 | CNFpred | ----------------------------------------------------------QGFFHLNLMWILGGVIGVFLAI-------DMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYN-VWTFNYEEL-YLLMLGFFIAFAVKMPVVPGWLPDA----HSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEAPIAMWLGVIGIFYGYTSVSHMGFVLIAIYTGSLAYQGAVIQMIAHGLSAAGLFILCGQLYE------- | |||||||||||||
9 | 5ezmA1 | 0.11 | 0.09 | 3.29 | 1.03 | Neff-PPAS | DWVTIRYNALKYFEKPFHMWVTVVGYELFGL-------------------------GEWQARLAVALSGLLGIGVSMMAARRWFAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKVGIALPGLVLVVYTLVTRRLHLALGVVVMLVITVPWFYLVSVRNPEFPNFFFIHEHWQRRSGSVFYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSIS-------------RSKLPGYIVPVIPALGILAGVALDRL---------- | |||||||||||||
10 | 6ei3A | 0.06 | 0.06 | 2.72 | 1.04 | PROSPECTOR2 | LQEVGAPELALFEDKPLVASFMVDQFDQSNVRVPLPPKDPHGFGAVVRSALLAHAPGQGRPGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDAAVRALLRVLVIFALVTPFFSLFDQKASTWVLQMPAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPTGGEPMHIAWQILPYALLTFGEVLVSATGIEFAYSQAPPSMKFWYLTTTVGNLWVLLSNVAVRNATVTSHIADTGLSEAAFLMFFFAAFAAFGLYARRYRMVDNYYFQ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |