>PF12262 (241 residues) KVTFESEVQALLDRGTSISFTIQGANADVPAPSYLLMDTSDGTLGLPTNGDDALTNPRAS MNTMDGWSTSMPIVLNFKGDGFAPGMLASGVKVIKINQRLTEWDGKTNPIAKVLVQNQDY VVQANGKSLYVQFADSLDESSEYIFAVTQDVTDVNGEPIGTSSSYAVAKSKQVKYESGDL ASVQAVTEAVEGIFGLAQVNPADIVYSSWFSTQSVGDTLAAVKGVTATGFATGANTLNTI Y |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | KVTFESEVQALLDRGTSISFTIQGANADVPAPSYLLMDTSDGTLGLPTNGDDALTNPRASMNTMDGWSTSMPIVLNFKGDGFAPGMLASGVKVIKINQRLTEWDGKTNPIAKVLVQNQDYVVQANGKSLYVQFADSLDESSEYIFAVTQDVTDVNGEPIGTSSSYAVAKSKQVKYESGDLASVQAVTEAVEGIFGLAQVNPADIVYSSWFSTQSVGDTLAAVKGVTATGFATGANTLNTIY | |||||||||||||||||||
1 | 4hu2A2 | 0.15 | 0.06 | 2.10 | 1.19 | HHsearch-2 | --------------------------------------SP-AHLTM------------PYVMPGDVVGVGEPVAIRFDEN-IDRGAAEKAIK-ITTNP----------PVEGA------FY-WLNNREVRWRPEHFWKPGTAVDVAVNYGVDLGEGMFGEDN-------------------------------------------VQTHFTIG---------------------------- | |||||||||||||
2 | 3vaeA1 | 0.12 | 0.06 | 2.19 | 1.18 | HHsearch | -----------------------------------RYT----LNA-TAHLTMPYVMP---GDG-EVVGVGEPVAIRFDEN-IARGAAEKAIKITT-NP----------PVEG------AFYW-LNNREVRWRPEHFWKPGTAVDVAVNYGVDLGEGMFGEDNVQT-------------------------------------------HFTIGGDWNIPWDQWR--AGNAK---------- | |||||||||||||
3 | 1uf2T | 0.10 | 0.09 | 3.34 | 0.64 | SPARKS-K | VPMSDTVRQLNNLSLQ------PSAKPKLYERQNAIMKGLDIKLFRSVAGQTGNIPMMGILATPPAFFVAERILFGISNAAIPAGSVVTGAYVYFIAGVTATATAADAATTFTVPTDNNLPVQTDSGNINLELGVAK---TGFCVAIEGEFTILANR----SQAYYTL--NSITQTPTSIDDVSDFLTTFLSQLRACG--------------QYFSDAMDQLTNSLITNYMDPPAIPAGLA | |||||||||||||
4 | 5v4fA | 0.15 | 0.07 | 2.25 | 0.64 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------NRRVINPETYPSVPFGF----SHAVEQLSGRTLHIAGQVAWNANGELVGGQDLLAQTQQVLANLKEVLRYAGATPADVVRLRTYVVNHSPANLAAICAQIGAFYEGADPAANSF- | |||||||||||||
5 | 4hu2A | 0.14 | 0.08 | 2.83 | 0.58 | HHpred | -VTAADGLVNDNGRPVAGRLSPDG---LRWSTTEQLGYNRRYTLNATALGQTSPAHLMPYVMPGDVVGVGEPVAIRFDEN-IDRGAAEKAIKITT-N-P---------PVEGAFYW-------LNNREVRWRPEHFWKPGTAVDVAVNYGVDLGEGMFGEDNVQTH--------------------------------------------------------------------------- | |||||||||||||
6 | 6qrqB | 0.11 | 0.10 | 3.62 | 0.67 | MUSTER | ---FENILFD--NGQHKFMFLGWEEKEEEIVQTNYLILDGNEGILLDPGGAHVFPRVMSNVAEVVDLS---SIRHIF--LLWLSICENAKIYISSLWVRFLPHFGIYDQKRIVPISDKGTKIKLSGNELEILPAHFLHSTGNFVLYDPVAAVFEKGKRYRYVDDFERHLPLMEAFHKRYMSSNAACKKWVDMVSK---KKIDMIAPQHGAVF--RGESVKKFLEWFRNL-KCGVDLIDNLY | |||||||||||||
7 | 4ragA | 0.10 | 0.04 | 1.53 | 0.51 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------EVHDIERSEEDDQFIILACDGIWD----VMGNEELCDFVRSRLE------TDDLEKVCNEVVDTCLYKGSR-DNMSVILICFPNKVSPEAVKKEAELDKYLEC---RVEEII | |||||||||||||
8 | 4u48A1 | 0.17 | 0.07 | 2.45 | 1.03 | HHsearch-2 | -------------------------LAQQSQGKALTLL------DA---------SE-------AQLDGAATLVLTFSIP-LDPQDFSRVVHVVDAAS-------GSVDG--------AWELAPNLKELRL---RHLEPERVLVVTVDPAVKALNNATFGKSYE-------------------------------------------KTITTR---------------------------- | |||||||||||||
9 | 6qrqB | 0.09 | 0.09 | 3.30 | 0.72 | Neff-PPAS | ---FENEILFDNGQHKFMFLGWEEKEEEIVQTNQYLILDGNEGILLDPGGAHVFPRVMSNVAEV---VDLSSIRHIFYILLWLSICENAKIYISSLWVRLPHFGIYDQKRIVPISDKGTKIKLLSGNELEILPAHFLHSTGNFVLYDPVAAVFEKGKRYRYVDDFERHLPLMEAFHKRYMSSNAACKKWVDMVSK---KKIDMIAPQHGAVFRG--ESVKKFLEWFRNL-KCGVDLIDNLY | |||||||||||||
10 | 4u48A1 | 0.17 | 0.07 | 2.45 | 1.06 | HHsearch | -------------------------LAQQSQGKALTL---------------------LDAS-EAQLDGAATLVLTFSIP-LDPQDFSRVVHVVDAAS-------GSVDG--------AWELAPNLKELRL---RHLEPERVLVVTVDPAVKALNNATFGKSYEKTIT-------------------------------------------TR---------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |