Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | EVAVIMRRERLDNRWQPWRWTLDDVVPGEAAFGDVPRLLREDADETRWLFPGFAVELFKDDGEGYHLNLTSPAPCWFVLWRMDESGAEEGRLARPVAVSLSYHDAGRWLDAQEAVEQVPAPPAVLQALQAFVDEHYVPEPKRRRR |
1 | 2mr6A | 0.13 | 0.10 | 3.61 | 0.72 | SPARKS-K | | ------------------MGVVILVLTGDERIAEELREVQKDPNVKTVPTKD------KEKVKEEIEKARKQGRPIVVFVRIAEYAQKEG--LRVIVIIVSLRKGYEDKKKGYDVYTSRNEDEAKKKLKEALEKSGSLEHHHHHH |
2 | 4bxoB1 | 0.11 | 0.08 | 3.00 | 0.54 | FFAS-3D | | --HIVAN-----EKWRGSQ--------LAEEMQGKIKLIFEDGLTPDFYLSNRCCILYVTEADLYRKRLNSNNLKGIVVVEKTRMSEQY------------FPALQKFTVLDLGMVLLPVAMEASCLVIQLVQEQTKE------- |
3 | 5cuoA | 0.12 | 0.07 | 2.44 | 0.27 | HHpred | | -----------------------LRQSGQLD-DTPGLTIIGPQGSVTKIVAQRHIHMHPSTAA--KLGLRGERGGVMVLIRVAEA-----SA---DEMHIDVEEANALLKNDDVVRIC--------------------------- |
4 | 4wj3M | 0.17 | 0.17 | 5.46 | 0.62 | MUSTER | | HMPFAMRRYGSDKPDLRIPLELVDVADQLKEVEFVFSGPANDPKVAALRVPGAA-SMPRSQIDDYTKFVGIYGAKGLAYIKVNERAKGVEGLQSPIVKFIPEANLNVILDRVGAFFGADKAKIVCDALGALRIKVGHDLKLLTRE |
5 | 5xguA | 0.15 | 0.13 | 4.41 | 0.69 | CNFpred | | DDAVYCEKKR------GGGWRLWVAIADVSYYVRPSTPLDREARGTSVYFPSQVIPMLPEVLSNGLCSLNVDRLCMVCEMTVSSKGRLTGYKFYEAVMSLTYTKVWHILQGDQDLREQ--YAPLVKHLEELHNLY---------- |
6 | 4hwgA3 | 0.13 | 0.03 | 1.19 | 0.65 | HHsearch-2 | | -----------------------------------------------------------------------------------------------------------HMEAGNRCFDQRVPEEIRKIIDHISDVNITLTEHARRY |
7 | 2l69A | 0.09 | 0.08 | 2.88 | 0.83 | Neff-PPAS | | ------------------MNIVIVVFSTDEETLRKFKDIIKKNGFKVRTVRS------PQELKDSIEELVKKYNATIVVVVVDRFVKSLGAQVLIIIYDQDQNRLEEFSREGFEVRTVTSPDDFKKSLERLIREVGSLEHHHHHH |
8 | 4hwgA3 | 0.14 | 0.03 | 1.19 | 0.48 | HHsearch | | -----------------------------------------------------------------------------------------------------------HMEAGNRCFDQRVPEEIRKIIDHISDVNITLTEHARR- |
9 | 2l69A | 0.13 | 0.10 | 3.61 | 0.93 | SP3 | | ---------------------MNIVIVVFSTDEETLRKFKDIIKKN-----GFKVRTVRSELKDSIEELVKKYNATIVVVVVDDKEWSLGAQVLIIIYDQDQNRLEEFSRRGFEVRTVTSPDDFKKSLERLIREVGSLEHHHHHH |
10 | 2l69A | 0.11 | 0.09 | 3.26 | 0.67 | PROSPECTOR2 | | MNIVIV------------------VFSTDEETLRKFKDIIKKNGFKVRTVRS------PQELKDSIEELVKKYNATIVVVVVDDKEWSLGAQVLIIIYDQDQNRLEEFSRRGFEVRTVTSPDDFKKSLERLIREVGSLEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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