>PF11727 (280 residues) HILLVFSAVASASEESYKIDRYKADRKLDKEGAIALCKLRDVLTNISEETTDYLVEEVQK MGESLKMDMDAINYYVKRVRSLKESGREDAKINESDSNEIDSLCKEAKAHANKKSRDQVD QTVAKIRRVSGIVKDAATKTLGDENELEDHDNADGIFKVFNWHCGGDRIGEVHAGSQSCD VIGFRKNFSAGQRNVISCKKWKDEYGETIPHENVTVTQMESYLSRWFEARPKRVGEDICK DGEYHSPHSCTVWEGWVTGYEETMEKMEELRNNIKKLNRI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | HILLVFSAVASASEESYKIDRYKADRKLDKEGAIALCKLRDVLTNISEETTDYLVEEVQKMGESLKMDMDAINYYVKRVRSLKESGREDAKINESDSNEIDSLCKEAKAHANKKSRDQVDQTVAKIRRVSGIVKDAATKTLGDENELEDHDNADGIFKVFNWHCGGDRIGEVHAGSQSCDVIGFRKNFSAGQRNVISCKKWKDEYGETIPHENVTVTQMESYLSRWFEARPKRVGEDICKDGEYHSPHSCTVWEGWVTGYEETMEKMEELRNNIKKLNRI | |||||||||||||||||||
1 | 6elcA | 0.13 | 0.11 | 3.95 | 1.16 | FFAS-3D | ----------------------------NKEDFAVLCALAALANLIDTSGLAAYDNLQQLNLPTWRKQWPIWVTAAAALEAAVLARAGLTNAPEELRNRARLALIPLLAQA-EQIRDRLSEIQKQNEDTPTAIAKALNKAVGQDKETGQASKATTVAATIVCVCH--KKNGGNDAANACGRLINHQSDAGANLATASC--------AARPPKPLTAAYLDSALAAVSARIRFKNGFKATGCTGSASEGLCVEYTPWVKEISNVAEALKRTEKDAAESTLL | |||||||||||||
2 | 5vtlA | 0.15 | 0.11 | 3.60 | 1.01 | Neff-PPAS | --------------------------QNTVSHVSAACLFSEALHGI-PFGVKVLKALAAANVSDASKAREGCQDAVRRAEDAFSST----PKVEEAVGRARAALKEAESAENKTALSDVEQYAANAPLLAAGKTAPIDDYLKSVAEDNSAA-------------------------------------STARRIARGCSLPNR---------GVNSWVLKKAVEFGCEFFT----GDICKILTDGMADLRAEYDQLEAAVRRASEARVAARAAESNARKA | |||||||||||||
3 | 5vtlA | 0.11 | 0.07 | 2.69 | 1.08 | HHsearch | --------------------------QNTVSHVSAACLFSEALHGIPF-GVKVLKALAAANVSDASKAREGCQDAVRRAEDAFSSTP-KV--EEA-VGRA----RAALKEAESA-ENAAKTALSDVEQYAANAPLLAAGKTA--------PIDDYLKSVAED--------------NSAAS-TARR-------IARGCSLP---------NRGVNSWVLKKAVEFGCEFFTGDI------------------CKILTDGMADLRAEYDQLEAAVRRASE- | |||||||||||||
4 | 4e40A | 0.11 | 0.09 | 3.34 | 1.11 | PROSPECTOR2 | --------------------GEIKVELEDSDDVAAACELRAQLAGVSIASAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNETAQKVRKAAAVHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAK------ANGDASAVKVSNLLARAKESENQYVKEAAEECSESTNYDVTAKSLAAALDKLPGVKEDNAVKTTFQSILTSLDNLDKDVKSVEQR--------------------AEELETALEKAERQLEKAEKAAEEAEKV | |||||||||||||
5 | 4e40A | 0.13 | 0.10 | 3.56 | 0.88 | SPARKS-K | ---------------------GEIKVELDSDDVAAACELRAQLAGVSLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNE------TAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANASAVKVSNLLARAKESE-NQYVKEAAEEC---------------------------SESTNYDVTAKSLAAALDGVKED----------NAVKTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQ | |||||||||||||
6 | 4e40A | 0.14 | 0.11 | 3.64 | 1.15 | FFAS-3D | ----------------------------DSDDVAAACELRAQLAGV-SIASGILLRPAVIRNATTEFSRKKSEAAVERASAAVDRVSGLDK-TNETAQKVRKAAAVAH-HALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKA-----NGDASAVKVLLARAKESENQYVKEAAEECS---------------------------ESTNYDVTAKSLAAALDKLPGVKEDNAVKTTFQS-------ILTSLDNLDKDVKSVEQRAEELETALEKAER- | |||||||||||||
7 | 5vtlA | 0.11 | 0.07 | 2.69 | 0.51 | HHpred | --------------------------QNTVSHVSAACLFSEALHGIPF-GVKVLKALAAANVSDASKAREGCQDAVRRAEDAFSSTP-KV--EEA-VGRA----RAALKEAESA-ENAAKTALSDVEQYAANAPLLAAGKTA--------PIDDYLKSVAED--------------NSAAS-TARR-------IARGCSLP---------NRGVNSWVLKKAVEFGCEFFTGDI------------------CKILTDGMADLRAEYDQLEAAVRRASEA | |||||||||||||
8 | 4e40A | 0.14 | 0.12 | 4.02 | 0.90 | MUSTER | ---------------------GEIKVELDSDDVAAACELRAQLAGVS-RPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNTAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDAS-----AVKVSNLLARAKESENQ----------YVKEAAEECSESTNYDVTAKSLAADKLPGVKEDNAVKTTFQSILTSLDNL------DKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETESSKV--- | |||||||||||||
9 | 2y44A | 0.12 | 0.07 | 2.65 | 0.81 | CNFpred | ----------------------------KVEEVQTMCDVARQLRALE-TASQSAVAAVVSSAREASEAKERAEKAVERAKSKKR-----------GVDTATEAAARAA-----AAAQRAETVVSDARKHAADLTAASKDAI------------ETTDESLRLLATMEADEPIRTAAKKCTGAAA----------------------------EVTSKSLESAFDALAELLPD-------------------GADDIREHGAVFVKGLKSLEDDVRTAGEA | |||||||||||||
10 | 5vtlA | 0.11 | 0.07 | 2.69 | 0.93 | HHsearch-2 | --------------------------QNTVSHVSAACLFSEALHGIPF-GVKVLKALAAANVSDASKAREGCQDAVRRAEDAFSSTP-KV--EEA-VGR----ARAALKEAESA-ENAAKTALSDVEQYAANAPLLAAGKTA--------PIDDYLKSVAED--------------NSAAS-TARR-------IARGCSLP---------NRGVNSWVLKKAVEFGCEFFTGDI------------------CKILTDGMADLRAEYDQLEAAVRRASEA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |