>PF11677 (261 residues) DNCHTNRGPCFQISGFFGTTLRIGFFLEFIALTFLFMSYWSNGGKGLFSYDLKNINDEYR LDQTFRNSITLWTGVYLIGAIFIMSFQVLLADDTCWARGYRAGSKILRLASFLDTISATL QFIFYLYISKFYTRKWYVHFNEGGSEWVFFIFVRLVHAFSCLLYGLAAYLLEVYHDEGAG DLHAYINGVMFVFAGLTEIFVIFCNSGCYSNLLLWLALGAVSLWSYYFEPEVNHVSPALH ETELTNDVEQQVEKFSRYTPY |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | DNCHTNRGPCFQISGFFGTTLRIGFFLEFIALTFLFMSYWSNGGKGLFSYDLKNINDEYRLDQTFRNSITLWTGVYLIGAIFIMSFQVLLADDTCWARGYRAGSKILRLASFLDTISATLQFIFYLYISKFYTRKWYVHFNEGGSEWVFFIFVRLVHAFSCLLYGLAAYLLEVYHDEGAGDLHAYINGVMFVFAGLTEIFVIFCNSGCYSNLLLWLALGAVSLWSYYFEPEVNHVSPALHETELTNDVEQQVEKFSRYTPY | |||||||||||||||||||
1 | 5uz7R | 0.09 | 0.07 | 2.79 | 1.06 | FFAS-3D | ----------------LYYLAIVGHSLSIFTLVISLGIFVFF----------------RSLGCQRVTLHKNMFLTYILNSMIIIIHLVEVRRDPVSCKILHFFHQYMMACNYFWMLCEGIYLHTLIVVAVFTEKQRLRWYYETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKRETHMYLKAVKATMILVPLLGIQFVVFPKMLGKIYDYVMHSLIHFQGFFVATIY---------CFCNNEVQTTVKRQWAQFK----- | |||||||||||||
2 | 5gpjA | 0.10 | 0.08 | 3.16 | 1.21 | CNFpred | --------PALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARK---GVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADL-----------PRNPAVIADNVGDNVGDIAGMGSDLFGSYA---ESSCAALVVASISSFGLNHELTAML-----YPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAV | |||||||||||||
3 | 5cwmA | 0.09 | 0.08 | 3.03 | 1.02 | PROSPECTOR2 | DP-----------------EDELKRVEKLVKEAEELLRQAKEKGS--------------------EEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERRVREEARELQERVKELRER | |||||||||||||
4 | 6cc4A | 0.09 | 0.08 | 3.11 | 0.94 | SPARKS-K | AAEQLKTTRNAYIQKYLKSLAAVSMFSRVLGFARDAIVARIFGA-----------------GMATDAFFVAFKLPNLLRRIFAGAFSQAFVPILAEYKSKQATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAFNPPVLALAWAVTVGGVLQLVYQLPHLIGMLVLPRINFHDAGAMRVVKQMGPAILGVSV | |||||||||||||
5 | 5ee7A1 | 0.12 | 0.10 | 3.51 | 1.05 | FFAS-3D | ----------------FQVMYTVGYSLSLAALLLALAILGGL---------------SKLHCTANAIHANLFLSFVLKASAVLFIDGLLRTVSTWLSDGAVAACRVAAVFMQYGIVANYCGLYLHNLLGLRSFFSLYLGITNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKHHTDYAFRLAKSTLTLIPLLGVHFVVFAFVHRSAKLFFDLALSSFQGLLVAVLY---------CFLNKEVQSELRRRWHR------- | |||||||||||||
6 | 4ybqA1 | 0.18 | 0.13 | 4.38 | 0.25 | HHpred | -----------------KLTLVLALA-TFLAAFGSF----------QYGYNVAAIESF--TL---TLLWSLTVSMFPFGGFIGSLMVGFLVN--------NLGRKALLFNNIFSILPAILMGCS-----KIAK------------SFEIIIASRLLVGICASSNVVPMYLGELAPKNLRGALGVVPQLFGILVAQLFGLRSVLAEEGWPILLGLTGVPAGLQLLLLPFFPESPRYLLKKNES----AAEKALQTLRGWK-- | |||||||||||||
7 | 5y50A2 | 0.13 | 0.11 | 3.87 | 0.87 | MUSTER | ---------SMSLFEGMGEFFRFGIPSASMICLEWWSFEFLV----LL---SGILPNPKLEASVLSVCLSTQSSLYQIPESLGAAASTRVA------NELGAGPKQARMAVYTAMVITGVESIMVGAIVFGARNVFGYLFSSETEVVDYVKSMAPLLSLSVIFDALHAALSGVARGSGRQDIGAYVNLAAYYLFGIPTAILLAFGFKMRGRGLWIGITVGSCVQAVLLGLIVILTNWKKQARKARERVM------------ | |||||||||||||
8 | 3rkoC | 0.08 | 0.07 | 2.86 | 1.19 | CNFpred | ----------FGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEK---------YQGFFHLNLMWILGGVIGVFLAIDMFLFFWEMMLVPLIALWGRITAATKFFIYTQASGLVMLIAILALVFVHYWTFNYEELLNTPM-SSGVEYLLMLGFFIAFAVKMPVVPGWLPDAHSQ--APTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMA-----FAQTDIKRLAYTSVSHMGFVLIA | |||||||||||||
9 | 3jacA | 0.13 | 0.12 | 4.22 | 0.48 | HHsearch-2 | GGGGGGGGGGGFFHDILHTKYRAMFLADIVDIIIIIFGFWAFGKHSAA-TDIASSLSDDQVPQAFLF-MLLV------------QFGTMVIDRALYLRKTVL-GKLAFQVVLVAIHIAVAQLWYFVKCIYFYPTRILGNFLT--------KKYNHLNLFLFQGFRLVPFLMDWVWTDTTLSLSNWMCVNIFIIKCSRETEKKYQPKKVKYGGGLIILFLIAIIWFPSIRSVVGVVTVPFTPEELSQQFDPYPLAMQFISQY | |||||||||||||
10 | 5xjjA1 | 0.12 | 0.11 | 3.81 | 0.97 | Neff-PPAS | ------SGQLTAELKRVTRLAAPMATVTIAQYLLPVISVMVAGHNG------ELQLSGVALATSFTNVTGFSIMYGLVGALETLCGQAYGAKQ------YEKIGTYTYSAIASNIPICFIISIIWFYIENILISLGQDPDISRIAGSYAFWLIPVLFAQAIVIPLTRFLLTQ-----GLVLPLLYTAVTTLLFHVFVCWVFVLVFVLGSNGPAMATSVSFWFYAVILSCYVRFSSSCEKTRGFVSEDFVSCVKQFFQYGVP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |